| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2960 |
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| Symbol | |
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| ID | 3969959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3238478 |
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| End bp | 3240211 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926071 |
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| Product | cytochrome |
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| Protein accession | YP_532824 |
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| Protein GI | 90424454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.992406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGGCT CTTTGCGAGC TGCGCCACTT TATTGTGGCG CGGCAACGGT GGATCGTGCG
CCGGTGAAAC ACACCGGTCG TCCGGCGATC GGCGGGCAGG GTCGGGCAAC CCTGACCGAG
CCGATCGTCC AGGCCCGAGA CTCGGCTCGG GCGTTTCTAT CAGCTCTGAC ACTGGCGGCG
ATGATGGCGC TGGGGCTGCT CGCCCCAGCC AGCGCCGAGG ACGCAGCGGT TTCTGATGGG
CGGGGGCGGC TCGACCGCAC GCCGCCGCTG TCGAGCACGG TCGACCCCGA CGTCGCGGCG
CTGGCGGACT ACGCCGCGCA AAATCTCACC GGCTCCGACG CCAAGCCGAA TTATTCGCCG
GCACAGCCTG GTTACGGGGC GATCGCCGCG CACGCCGGCC TCGGTCTCGG CTCAGGCCTA
TCGGCGGCGC ATGGCGCGTC GCCGCATGGC GGGAGCGGCG GCGGGCACGG CAGCGCGCGC
CGCTTCACCA CGCTGCTCGA CGGATCGAAT GACCGCGTCG CTGCAATCCT GACATTGCCG
GACGATCCGA TGTTCAAGGC CGTCGCCGAA TATGTCCGGC TGGGGGCCGC GATGAAGGTC
GCAACCACAG CCGAGCAGCG AATTCTGCGC GGCCATGAGC AGCGTCACCT GCGGGCGCAG
CGCGTCCGGC ACGAGCCCGA CTACGTCGCG CTGATGCCTG AGCCGCGCGA GGCGACGGTG
AAGACCTGGG TGGCGCTGGA AAACTTCGAG GACAACCCCG ATACCCCGCC ACAATTCGAT
TTCGTCCAGA TCCTGGCGGC GAAGACCGAC GGTTGGAAGC CGATCCTGAT CGCGGTGCAG
AAGCAGACCC AAGCCGCCGT CGGCAGTGCG CGGGCACCGA TGGTGGCGCC GGCGCCGGGC
GATCCGGACG GGCGCTACTT CGTCGGCTCG AAGCCATGCG AGACCTGTCA CGCCGGCCTG
TTCGACGAAT TCCAGCAGAC CGTGATGGGC CGCAACATCA AGTCCGGCAA GCTCACCCCG
CAGGGCAAGA TGGAATGCGA GACCTGCCAC GGTCCCGGCT CCGCCCACGT CAACGGCGGC
GGCGGGCGCG AAAAGGGCGG CATCCGCTCG TTCCGGCTCA CCGACAGCCG CGGCGTCGAC
GTCGCCGATT TCAACGGTGT CTGTCTGAGC TGCCACGAGA AGGGCGACCA GACCTATTGG
CAGAGTTCGG CCCATGAGAG CCGGGGCCTA GCTTGCGTCA ACTGCCACAC CGTGATGCGC
AAGGTCTCGC CGCGCAACCA GCTGAAAACC GAACTGGTGA TGGATACCTG TTTCCAGTGT
CACAAGGATC GTAAGGCGCA GGCGCAGCGC ACTTCGCACA TGCCGGTCCG CGAGAACAAG
ATTACTTGCG TGAACTGCCA CAACCCGCAC GGCAGCGCCT CCGAGAAGCT GCTGCGCGAG
GCGACGGTCA ACGACACCTG CTTCCAGTGT CATGCCGACA AGCGCGGGCC GTTCCTGTTC
GAACACCCGC CGGTGCGCGA GAACTGTCTG AACTGCCACG AGCCGCATGG TTCCAACCAT
GAATCGCTGC TGATCGTGGC GCGGCAGCGG CTGTGCCAGC AGTGCCATAC CAACCCGCAC
AATCAGCCGG GACTTCCGGC GGCGGCGCGG TGGGCGGTCG GCAATGCCTG CCAGAATTGT
CACACCAACA TTCATGGATC GAACGCGCCG TCGGGGTCGC GATGGCACCG CTAG
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| Protein sequence | MGGSLRAAPL YCGAATVDRA PVKHTGRPAI GGQGRATLTE PIVQARDSAR AFLSALTLAA
MMALGLLAPA SAEDAAVSDG RGRLDRTPPL SSTVDPDVAA LADYAAQNLT GSDAKPNYSP
AQPGYGAIAA HAGLGLGSGL SAAHGASPHG GSGGGHGSAR RFTTLLDGSN DRVAAILTLP
DDPMFKAVAE YVRLGAAMKV ATTAEQRILR GHEQRHLRAQ RVRHEPDYVA LMPEPREATV
KTWVALENFE DNPDTPPQFD FVQILAAKTD GWKPILIAVQ KQTQAAVGSA RAPMVAPAPG
DPDGRYFVGS KPCETCHAGL FDEFQQTVMG RNIKSGKLTP QGKMECETCH GPGSAHVNGG
GGREKGGIRS FRLTDSRGVD VADFNGVCLS CHEKGDQTYW QSSAHESRGL ACVNCHTVMR
KVSPRNQLKT ELVMDTCFQC HKDRKAQAQR TSHMPVRENK ITCVNCHNPH GSASEKLLRE
ATVNDTCFQC HADKRGPFLF EHPPVRENCL NCHEPHGSNH ESLLIVARQR LCQQCHTNPH
NQPGLPAAAR WAVGNACQNC HTNIHGSNAP SGSRWHR
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