Gene RPC_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2951 
Symbol 
ID3969950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3228579 
End bp3229550 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID637926062 
Productinner-membrane translocator 
Protein accessionYP_532815 
Protein GI90424445 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCTCCGACCA GGCCGTTCCT GTCGCCGGCC GTCGCGCCGT CCGCGACGAA 
ATGATCGCCT TTGCCGTCAT GACCGCGCTG CTGGCGGTCG TGCCGTTGAC CGGGGTGTAT
CCGTTTTTCG TCATGCAAGG GCTGTGCTTT GCGTTGTTGG CGTGCGCCTT CAACCTGTTG
ATCGGCTACG GCGGGCTGCT GTCGTTCGGC CACGCGATGT TTCTCGGCAC CGCGGGTTAT
GCCAGCGCGC ATGCGCTGAA GGTGTGGGGC GTGTCGCCCG AACTCGGCAT ATTGATCGGC
ACCGCCGCTG CCGCCGCACT CGGCGTGATC ACCGGGCTGG TCGCGATCCG CCGGCAGGGC
ATCTACTTTG CGATGATCAC GCTCGCCTTG TCGCAGCTGT TGTACTTCGT GTATTTGCAG
ACGCCGTTCA CCCATGGCGA GGACGGCATT CAGGGCATTC CGCAGGGGCA TCTTTTCGGC
TTCATCGATC TCGGCAAGCC GACCACGCTG TACTACGTGA TCCTGGTCGG CTTCTTGTTG
GGTTTTCTGG TGATCTATCG TGCGATCAAT TCACCGTTCG GCGAAGTGCT GAAGGCGATC
CGCGAGAACG AGCCGCGCGC GATCTCGCTG GGCTACAAGA CCGATCATTA CAAGCTCTTG
GCCTACATCC TGTCGGCGAC GCTGGCGGGG TTTGCCGGGT CGCTGAAGGT GTTCGTGGCG
CAGAACGCGT CATTGACCGA CGTGCACTGG ACGATGTCCG GCGAAATCGT GCTGATGACG
CTGGTCGGCG GCCTCGGCAC CATCTACGGA CCGGTGGTCG GCGCCTTCGT GATCATCGCC
ATGCAGCAGT ATCTGGCCGG GTTCGGTCAA TGGGTGACGG TGATCCAAGG CGTGATCTTC
GTGATCTGCG TGCTGACCTT CCGGCGCGGC GTGATCGGTG AAATCGCGCA CTACTTCAAG
CGCTCGCTGT AA
 
Protein sequence
MTSISDQAVP VAGRRAVRDE MIAFAVMTAL LAVVPLTGVY PFFVMQGLCF ALLACAFNLL 
IGYGGLLSFG HAMFLGTAGY ASAHALKVWG VSPELGILIG TAAAAALGVI TGLVAIRRQG
IYFAMITLAL SQLLYFVYLQ TPFTHGEDGI QGIPQGHLFG FIDLGKPTTL YYVILVGFLL
GFLVIYRAIN SPFGEVLKAI RENEPRAISL GYKTDHYKLL AYILSATLAG FAGSLKVFVA
QNASLTDVHW TMSGEIVLMT LVGGLGTIYG PVVGAFVIIA MQQYLAGFGQ WVTVIQGVIF
VICVLTFRRG VIGEIAHYFK RSL