Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2951 |
Symbol | |
ID | 3969950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3228579 |
End bp | 3229550 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637926062 |
Product | inner-membrane translocator |
Protein accession | YP_532815 |
Protein GI | 90424445 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0213557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGA TCTCCGACCA GGCCGTTCCT GTCGCCGGCC GTCGCGCCGT CCGCGACGAA ATGATCGCCT TTGCCGTCAT GACCGCGCTG CTGGCGGTCG TGCCGTTGAC CGGGGTGTAT CCGTTTTTCG TCATGCAAGG GCTGTGCTTT GCGTTGTTGG CGTGCGCCTT CAACCTGTTG ATCGGCTACG GCGGGCTGCT GTCGTTCGGC CACGCGATGT TTCTCGGCAC CGCGGGTTAT GCCAGCGCGC ATGCGCTGAA GGTGTGGGGC GTGTCGCCCG AACTCGGCAT ATTGATCGGC ACCGCCGCTG CCGCCGCACT CGGCGTGATC ACCGGGCTGG TCGCGATCCG CCGGCAGGGC ATCTACTTTG CGATGATCAC GCTCGCCTTG TCGCAGCTGT TGTACTTCGT GTATTTGCAG ACGCCGTTCA CCCATGGCGA GGACGGCATT CAGGGCATTC CGCAGGGGCA TCTTTTCGGC TTCATCGATC TCGGCAAGCC GACCACGCTG TACTACGTGA TCCTGGTCGG CTTCTTGTTG GGTTTTCTGG TGATCTATCG TGCGATCAAT TCACCGTTCG GCGAAGTGCT GAAGGCGATC CGCGAGAACG AGCCGCGCGC GATCTCGCTG GGCTACAAGA CCGATCATTA CAAGCTCTTG GCCTACATCC TGTCGGCGAC GCTGGCGGGG TTTGCCGGGT CGCTGAAGGT GTTCGTGGCG CAGAACGCGT CATTGACCGA CGTGCACTGG ACGATGTCCG GCGAAATCGT GCTGATGACG CTGGTCGGCG GCCTCGGCAC CATCTACGGA CCGGTGGTCG GCGCCTTCGT GATCATCGCC ATGCAGCAGT ATCTGGCCGG GTTCGGTCAA TGGGTGACGG TGATCCAAGG CGTGATCTTC GTGATCTGCG TGCTGACCTT CCGGCGCGGC GTGATCGGTG AAATCGCGCA CTACTTCAAG CGCTCGCTGT AA
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Protein sequence | MTSISDQAVP VAGRRAVRDE MIAFAVMTAL LAVVPLTGVY PFFVMQGLCF ALLACAFNLL IGYGGLLSFG HAMFLGTAGY ASAHALKVWG VSPELGILIG TAAAAALGVI TGLVAIRRQG IYFAMITLAL SQLLYFVYLQ TPFTHGEDGI QGIPQGHLFG FIDLGKPTTL YYVILVGFLL GFLVIYRAIN SPFGEVLKAI RENEPRAISL GYKTDHYKLL AYILSATLAG FAGSLKVFVA QNASLTDVHW TMSGEIVLMT LVGGLGTIYG PVVGAFVIIA MQQYLAGFGQ WVTVIQGVIF VICVLTFRRG VIGEIAHYFK RSL
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