Gene RPC_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2939 
Symbol 
ID3969996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3214785 
End bp3215831 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content72% 
IMG OID637926050 
Producthypothetical protein 
Protein accessionYP_532803 
Protein GI90424433 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAC CGCGCCGCAT GCAACATCGC CCGTTCCCCG ACCTGCGGAT GACCGCGCTG 
CACGACTACC GCGCGCCGTG GTGGCTGCCG GGCGGCGACC TGCAGACGAT CTGGCCGGCG
CTGCTGTTGC GGCCGTGGCG CGCCGCCGGG CCGGCCTATC GGCGCGAGCG CTGGCAGGCG
CCGGACGGCG ATTTCATCGA CGTCGACCAC CTGCAAGGCG CGCGCGGCGC GCCCTGGCTG
GTGCTGTTCC ACGGCCTCGA GGGCAGTTCG TCGAGCCATT ACGCGGTGGC GTTCGCGCAG
GCGGCGAAGG CGCGCGGCTG GCATTTCAGC GTGCCGCATT TCCGCGGCTG TTCGGGCGAG
CCGAATCTGG CGCCGCGCTC CTATCATTCC GGCGACTTCG AGGAGATCGG CTGGATGCTC
GGCCGGATCC GCGAGGCCGC CGGCGCGCCG GTGCTGGCCG CCGGCGTCTC GCTCGGCGGC
AACGCGCTGC TGCGCTGGGC GGAGGAAGCC GGCTCCACCG CGACGCCGGT GGTGCGGGCG
CTGGCGGCGG TCTCGGCGCC GCTGGATCTC GCCGCCGCGG GGGCTGCGAT CGACCGCGGC
TTCAACCGGC TGGCCTATGC GCAGCATTTC CTGCGCACCA TGAAGCCGCA CGCGCTGGCG
AAATGGCAGC AGCACCCTCG ATTGTTCGAC CGCGAGCGGC TGATCGCGGC GCGCACCTTG
CGCGAGTTCG ACGACTGCTT CACCGCGCCG CTGCACGGCT TTTCCAGCGT CGACGATTAC
TGGCGCCGCG CCTCCGCCAA GCCGCATCTG GTCGCGATCC GGGTGCCGAC GCTGGTGTTC
AACGCCCGCA ACGATCCGTT CGTGCCGGAG CAATCCCTCC CCAACCCGAA CCAGGCCGGC
CCCGAGGTGA TGCTGTGGCA GCCCGACCAT GGCGGCCATG TCGGCTTCCC CACCGGCCGC
TTTCCCGGCC ACGTCCACGC CATGCCGGAG GCGGTGTGCG ACTGGCTGGA GGCGGCGGCG
GCGACGGAAG CCAGCCATCC GCTTTGA
 
Protein sequence
MPVPRRMQHR PFPDLRMTAL HDYRAPWWLP GGDLQTIWPA LLLRPWRAAG PAYRRERWQA 
PDGDFIDVDH LQGARGAPWL VLFHGLEGSS SSHYAVAFAQ AAKARGWHFS VPHFRGCSGE
PNLAPRSYHS GDFEEIGWML GRIREAAGAP VLAAGVSLGG NALLRWAEEA GSTATPVVRA
LAAVSAPLDL AAAGAAIDRG FNRLAYAQHF LRTMKPHALA KWQQHPRLFD RERLIAARTL
REFDDCFTAP LHGFSSVDDY WRRASAKPHL VAIRVPTLVF NARNDPFVPE QSLPNPNQAG
PEVMLWQPDH GGHVGFPTGR FPGHVHAMPE AVCDWLEAAA ATEASHPL