Gene RPC_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2935 
Symbol 
ID3969991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3210943 
End bp3212208 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content57% 
IMG OID637926046 
Producthypothetical protein 
Protein accessionYP_532800 
Protein GI90424430 
COG category[S] Function unknown 
COG ID[COG3878] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.17294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGCAA CGAGTAATCA AGCGGGAGAG GGCAAGTCTA TGTTTGGTTG GTTCAAAAAA 
CCCAGCGGTA TGAGCCGCAA ACCCGAAACA GCGCATACTG GTGCCGACAT CGCCGCAGAG
TTCATGGCTC GCGCCGGATG GGAAGAGCCG GTTGCGCCGA CGCCTGGATG GGCGCTGCTG
CTCCGCTCGC CTTACGATAC TTCGAAGGTC GTTACATCCT GGCTAGGTGG AATTCCCCAT
GCTCCAACCG ATTTTTCCTG GCCCATGGAT ACCGACGGGA AGCCATTGCA TTTCATCGCC
CAGATCGATC TCGCATCATT GCAACCTGAG CCGGAAACGG GACTACGTCC GCCGGGATTA
CCCGAGCAGG GGGCGCTGCT GGTTTTCGTT GGCCGATCCT ACGCATGCCC TGTGCTGAGC
GTTGCCGACA TGGGGCGGGC GGTGCCGCTG TCATTACCCG ACCAACTGGA ACCCATCCGC
AAGCATGGTT TTTTTAGCGA CAAGCCGGTG TTCAGCTATT GGCCCATCGA CCCTGTAGCT
TTTCTCGACA CAGGCAGCGG GCGCCCGCCC TTTCTACCAG ATCCTTTCGA ACACCCCCGC
AATTGGATAA TCAACTGGGG CATCGCCGCG TTGGAAGCGG AAATCGTGAT TGAAAGTCTC
GAGCGCGAGC TCGGCTTTGG TCGTGATTTT TTGGCTCGGC TGCAGGGAAA CGGTGACGGC
CAGGCAAAAA ACAGAGTGAT TGAAAGCAAG ACTGCTTATT ACACGGTTAT GGCACGTAGC
GCCCCACCCG TGGTTTCGGC AATGAAGGCT TGGCGGGAGG CAGCTCTGTC GAAGCCGCCA
GAAGCGCTGA TAGACCAAGC TCAGGTCGAC GAAGTCTTCA CGGCGCGCCG GATTCTGCAC
GATAAGATCG AAGAAAATTA TCCGCCGAAG TCCCTTCTAC TCGGGCGGGC TAAGGCGTTT
TGGGAAAAGC TGTGCTTGAG CTATTCGCAG GAGAACGACT TCAGCCTGGT CCCGATGGCC
TTGCAGCCCT TCGTTGCAAT GTGGCTCACG GATTGGCGTG GCCATCGTCT CTTCGGGTTA
GAGCCACCGT TCCCCAACAA CGGAGAAGAT CGGCGCGGCC AGGATTGCCT CATAAGCGTC
GCTGCTGACC GGGTGTTGAA TACCGATTCT GAGCACGAAT ACGGCATGTC GATTTGGTGT
CCGAAACAGC GTCTGATGAA GGGACAATTC GAGCCGGGAC AGTTTATCCG CCACATTGCA
GTTTGA
 
Protein sequence
MTATSNQAGE GKSMFGWFKK PSGMSRKPET AHTGADIAAE FMARAGWEEP VAPTPGWALL 
LRSPYDTSKV VTSWLGGIPH APTDFSWPMD TDGKPLHFIA QIDLASLQPE PETGLRPPGL
PEQGALLVFV GRSYACPVLS VADMGRAVPL SLPDQLEPIR KHGFFSDKPV FSYWPIDPVA
FLDTGSGRPP FLPDPFEHPR NWIINWGIAA LEAEIVIESL ERELGFGRDF LARLQGNGDG
QAKNRVIESK TAYYTVMARS APPVVSAMKA WREAALSKPP EALIDQAQVD EVFTARRILH
DKIEENYPPK SLLLGRAKAF WEKLCLSYSQ ENDFSLVPMA LQPFVAMWLT DWRGHRLFGL
EPPFPNNGED RRGQDCLISV AADRVLNTDS EHEYGMSIWC PKQRLMKGQF EPGQFIRHIA
V