Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2921 |
Symbol | |
ID | 3970015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3185559 |
End bp | 3187340 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637926033 |
Product | hemolysin activation/secretion protein |
Protein accession | YP_532787 |
Protein GI | 90424417 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.502908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGATC GTAGTCGGTA CAAGGATCGC GGGCCATCGT CCGCGTGCTG GGCTTTGCTT TGCCTGAAGA CGGCCGTTGT GACGCTGGCG GCCAGCGCTG CGGTGTCATC GCCGGCATTC GCGGCAAAAC AGACGCGCGC GGATCGCTCG TCCGCGGCAA ACACGGCTGC ATCGAACGAG GCTGCGCGGC CTGCAGCGCT CTCGAATGCG CAGGCCGGAA CCGAAACGCT GCCGCAAACA CCCGCATCCA CACAGCGCTT CGATATCGAT GATTTTGCCA TCCAGGGCGC CGACAAGCTT CCGCAAATCG AAATCGAAGA AGCGATCTAT CCGTTCCTGG GACCAAACAG GGGCGTGGAG GATGTCGAGA AGGCCCGCGC CGCGCTGGAG AAAGCCTATC ACGACCGCGG CTATCAGACT GTCAGCGTCT CGGTGCCGGA GCAGAACGCC CAGCGCAAGG TCGTCACACT GAAAGTCACC GAACTGAAGG TCGGGCGGCT GCGCGTGAAG AACTCGCGCT ACTTCGACAT CGACAAGATC AAGAATCGCG CGGGCTCTCT GAAAGAGGGC GCGCTGCCGA ATTTCAATGA CGTGACAAAA GACGTCGTGG CGTTGAACCA GTGGTCGGAC CGGCGGGTAA CGCCGGCGCT GCGTGCGGGC GTCACGCCCG GTACCGTTGA CGTCGATCTC AATGTGGAAG ACACCGCGCC AATTCACGCC AGCGCCGAAT ACAACAACCG GCAATCACCC AACACGACGG CGACGCGGTT CAACGCGACG GTCCATTACG ACAATCTGTG GCAGCTCGGC CATTCGCTGA GCTTCAGCTA TCAAGTCGCG CCGGAGCGGA ACACGGACGC CGAGGTGTTT TCCGGCTCCT ATCTGGCGCG CGTGCCGAAC GTCGATTGGT TGAACGTTCT CGTCTACGCG GTGAAATCCA GCAGCAGTGT TGCGACCGTC GGCGGCATGA ATGTCGTCGG CCCCGGACAG ATCTTCGGCG GTCGCGCGGT GATGACGCTA CCGGCGCGGG AGAACTTCTT CCATACGCTG TCGGCGGGTC TCGACTACAA ACACTTCGAC CAGACCGTGA TGCTCGGCCG CGACGGTTTC TCCTCGCCGG TGACGTATTA CCCAGTGGTC GCAAGCTATG GCGCGACGTT TCAGAACGCG AACTTCACGA CCCAGCTCAA CGCGTCGGTG ACCTACAACC TGCGGCCGAT CAGCAGCGCG TGGGATGAGT TCGACGCAAA GCGCTACAAG GCGTCACCGA GCTTCACGCA CTACAATCTC GATGTGTCGC ACACCCATGA ACTGGGTGAG GGGTTTCAGC TTTACGGCAA AGCGCAGGGC CAGATCTCCG ATGGGCCGCT GGTCTCCTCC GAGCAGCTCA GCATCGGCGG CCTCGATACC GTGCGCGGCT ATCTCGAATC GGAGGTGCTG GGCGACAACG GCGTGGTCGG CAATCTGGAA TTGCGCAGTC CAAATATCGG CGAATGGCTG CAGAAGCACG TCAAGGACGA GACCGGGCAG GGGCCGTCGC GCTTCACCAC CTTCAACGAT TGGCGGGTCT TTGGCTTCGC CGATGGCGGT CACGCGACCG TGCTGACCTC GCTTCCAGAA CAGCGGGCGC AATTCGATGT CTGGAGCTAC GGCGTCGGCA CCCGCTTCAA GGTGTTCAAT TACGTCAACG GCATGATCGC CTATTCGGTG CCGATGGTCA GCCAAGCCTT CACGCAGGCG AACGATCCGC GTGTGAATTT CCGCATTTGG GGTGAGTTCT GA
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Protein sequence | MQDRSRYKDR GPSSACWALL CLKTAVVTLA ASAAVSSPAF AAKQTRADRS SAANTAASNE AARPAALSNA QAGTETLPQT PASTQRFDID DFAIQGADKL PQIEIEEAIY PFLGPNRGVE DVEKARAALE KAYHDRGYQT VSVSVPEQNA QRKVVTLKVT ELKVGRLRVK NSRYFDIDKI KNRAGSLKEG ALPNFNDVTK DVVALNQWSD RRVTPALRAG VTPGTVDVDL NVEDTAPIHA SAEYNNRQSP NTTATRFNAT VHYDNLWQLG HSLSFSYQVA PERNTDAEVF SGSYLARVPN VDWLNVLVYA VKSSSSVATV GGMNVVGPGQ IFGGRAVMTL PARENFFHTL SAGLDYKHFD QTVMLGRDGF SSPVTYYPVV ASYGATFQNA NFTTQLNASV TYNLRPISSA WDEFDAKRYK ASPSFTHYNL DVSHTHELGE GFQLYGKAQG QISDGPLVSS EQLSIGGLDT VRGYLESEVL GDNGVVGNLE LRSPNIGEWL QKHVKDETGQ GPSRFTTFND WRVFGFADGG HATVLTSLPE QRAQFDVWSY GVGTRFKVFN YVNGMIAYSV PMVSQAFTQA NDPRVNFRIW GEF
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