Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2920 |
Symbol | |
ID | 3970014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3183517 |
End bp | 3185559 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926032 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_532786 |
Protein GI | 90424416 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACGG GGTTGGGTGA CATGCGCGTG CGCAAATCGG GGTTTCGGCG GGCGACCGCA AATGTCTTGA CGGCTGCGTT GTTCGGGCTT GTCGGCGCCT TGACGCTGTT GCCCTCGCCA GCAAAAGCGT GGTGGAACGA CGACTGGTCG TTGCGCAAGA AGATCACCAT CGACGCCAGT GCCTCGGGCG CCGGCATCAC GGATCCGATC GGCACCACGC CGGTGCTGAT CCGGCTGCAT GTCGGCAACT TCCGGTTTGC TGCGGCGAAA GACGACGGCA GCGATCTGCG TTTCGTCGCC GGAGACGACA AGACACCGCT CAAGCACCAC CTCGAAAAGT ACGACTCGTT GCTCGGCGAA GCCCTGGTCT GGGTGGCGGT GCCGAACGTG CAGGCCGGTG CCAAGACCGA GATCTGGCTT TACTCCGGCA ACAAGAAGGC GGCCGCGACC AATGACGCGA AGGGGACCTA CGACCCGGAC ACCCTTCTGG TCTATCACTT CAGCGAACGC GGCACCCCGT CGCTGGACTC CTCGGTGTGG AGCAACAATG CGCAGAGCAT TGCCCAGCCG GCGGACGGCG CCATCGTCGG CACCGGGCTT CGCCTCGGTG GCAACTCGGC GCTGACGTTG CCGGCATCGT CGTCACTCGG CTTGGCAGCC AATGCGCCGT TTTCCTGGTC GGTCTGGATC AAGCCGGCCG CGCTGGTGCC GAACGCGGCG CTGTATAGCC GCCGCGACAC CGCGGCATCC AACGGGCTCG TCATCGGGCT CGACAATGGC GTCCCCTTTG TGGAGGTCAC CAATGCGGGC ACCATCCAGC GCAGCGGCGC TGGCGCGGCG CTCGCGCCGG GTGGCTGGCA TCATTTCGCG GCGATCGCCA ACAACGGTCA GGTCGCGCTC TATCTGGATG GCGCGCTCTA TGCGTCGGTT GCGGCGGCGC TGCCAGCACT CAATACAGTC GCCCTGATCG GGGGTGACAC GCCCACCTCC AATACATCCC CGATCGCCCC CGGGGCGGCG CCGTCCGCAT CCTCACAGTC TGATTCCGCT GCTGTGCCGG ATGCGGACGG TGGCGCGACC GCAACACCAG AGGCTGCTCC TGCCGCTCCG GCTCCGGTGG CGGCGCTGGC CGGCTTTGTC GGCGACATCG ACGAGTTGCA GATCGCCAAG GTGGCGCGGC CCGCGGGCTT CATCAAGTTT GCGGCGACCG GGCAGGGACC GGACGCAGCC AAGCTGGTGT CGTTCAGCGT CGATGAAGAA ACCGCAAGCT GGCTGTCGGG TTATTTTGCG GTGATCCTCA AATCGGTGAC GCTCGATGGC TGGGTCGTGA TCGGCATCCT GGCGATCATG GCGGCGCTGA GCTGGGTGGT GATGGTTGAC CGGGTCTCGT ACCTGAACAA GCAGACCAGG GCCAACGCCC GCTTCGCGAA GAGCTTCCGC GAGGTGTCTT CGGACCTGAC GATGCTTGAC CGCGGCGATG CCGATGAGAT CGCAACGCTA GGGGGCCGGC TGAGTGAAGA CGATGCGACG ATGATGCGCG CGTCGTCGCT CTATCGCATC TATCACATCG GCGCCTTGGA AATCCGCGGT CGCTTCGCCG GCAATGGAAC GCGCGCACCG ATCCTCTCGG CGACTTCGAT CGCGGCGATC CGCGCGACGC TCGACAGCGG TTACGTCAAG GAGATGCAGA AGCTCAACCG CCTCATGGTG GTATTGACCA TTGCGATCTC CGGCGGCCCG TTCCTAGGCC TGCTCGGCAC CGTGGTCGGC GTCATGATCA CATTCGCGGC GATTGCGGCG TCGGGCGACG TCAACGTCAA CGCCATCGCT CCGGGCATCG CGGCGGCTCT GGTGGCGACC GTCGCCGGCC TTGGCGTCGC GATCCCGGCG CTGTTCGCCT ACAACTACCT GATCTCGCGC ATCAAGGATC TGACCACCGA CATGCAGGTC TTCGTCGACG AGTTCGTCAC GAGGATGGCG GAGCTGTATT CCGCCGACCG CGAGCGGTCC GATCAGATCG ATCGACGCAT GGCCGCGGAG TAA
|
Protein sequence | MTTGLGDMRV RKSGFRRATA NVLTAALFGL VGALTLLPSP AKAWWNDDWS LRKKITIDAS ASGAGITDPI GTTPVLIRLH VGNFRFAAAK DDGSDLRFVA GDDKTPLKHH LEKYDSLLGE ALVWVAVPNV QAGAKTEIWL YSGNKKAAAT NDAKGTYDPD TLLVYHFSER GTPSLDSSVW SNNAQSIAQP ADGAIVGTGL RLGGNSALTL PASSSLGLAA NAPFSWSVWI KPAALVPNAA LYSRRDTAAS NGLVIGLDNG VPFVEVTNAG TIQRSGAGAA LAPGGWHHFA AIANNGQVAL YLDGALYASV AAALPALNTV ALIGGDTPTS NTSPIAPGAA PSASSQSDSA AVPDADGGAT ATPEAAPAAP APVAALAGFV GDIDELQIAK VARPAGFIKF AATGQGPDAA KLVSFSVDEE TASWLSGYFA VILKSVTLDG WVVIGILAIM AALSWVVMVD RVSYLNKQTR ANARFAKSFR EVSSDLTMLD RGDADEIATL GGRLSEDDAT MMRASSLYRI YHIGALEIRG RFAGNGTRAP ILSATSIAAI RATLDSGYVK EMQKLNRLMV VLTIAISGGP FLGLLGTVVG VMITFAAIAA SGDVNVNAIA PGIAAALVAT VAGLGVAIPA LFAYNYLISR IKDLTTDMQV FVDEFVTRMA ELYSADRERS DQIDRRMAAE
|
| |