| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2907 |
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| Symbol | |
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| ID | 3971935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3162020 |
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| End bp | 3162700 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926020 |
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| Product | secretin/TonB-like protein |
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| Protein accession | YP_532774 |
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| Protein GI | 90424404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.513574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.214462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGGCGG TTGCCGCCTT GGTCGGAGCG CTGATCTGTG TCGCCAAGGC GGCCGAGCCC
GAACAGCCAT CGGCGTCACA GCCGATTGAG TTTGCGATTG CTTCGCAGCC CCTCGCCAAC
GCCTTGCACG CCTATGGACG AAAGGTGGGC ATTCAGGTGC TTTACGAAAG CCGCTCAGCG
ATCGGCCGGC AGTCGGCGCC GGTGCAGGGA CAGTTCACCC CGGACGAGGC GCTCAAGCGC
CTGCTGGCGG GCACCGACCT CGAAGTCCGC CACGCGCGGG CGGACGCGAT CACGCTTGTT
GCGCCCGACG CGAGGGATAT GCCGCCGGTT AATCCATTGG CGACTGCCGA CCTGTCGATC
GGTGAACTGC GGGTTCGTGC ACCGGGCAAA TCCAATGATC TCGCTCGATT CCAGGACTAC
AGCGAGAGCG TCCGCGCCGA GATCCAGCGC GCGCTGCTGA AGAACACGAC AACGAGCTCC
GGCAATTATC GGGCGGTCCT CGATCTGTGG ATCGATGCCG ACCGCATGGT CAAAAGAGCC
GCGCTGTTGC AATCGACGGA TGATACCGCG CGCGACGCCG CCATCACCTC CACAATCCAA
GGCCTGACGA TCAATCGACC GACTCCCGCG GACGCCCCTC AGCCGGTGCG CGCGGTGATC
GTGGTGAGAA CATCCCGATG A
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| Protein sequence | MVAVAALVGA LICVAKAAEP EQPSASQPIE FAIASQPLAN ALHAYGRKVG IQVLYESRSA
IGRQSAPVQG QFTPDEALKR LLAGTDLEVR HARADAITLV APDARDMPPV NPLATADLSI
GELRVRAPGK SNDLARFQDY SESVRAEIQR ALLKNTTTSS GNYRAVLDLW IDADRMVKRA
ALLQSTDDTA RDAAITSTIQ GLTINRPTPA DAPQPVRAVI VVRTSR
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