| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2898 |
|---|
| Symbol | |
|---|
| ID | 3971926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3154713 |
|---|
| End bp | 3155588 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637926011 |
|---|
| Product | phosphoribulokinase |
|---|
| Protein accession | YP_532765 |
|---|
| Protein GI | 90424395 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3954] Phosphoribulokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.40634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.065685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTA AGCATCCGAT CATCTCCATC ACCGGCTCCT CCGGCGCCGG CACGACGTCA
GTCAAGCGTA CCTTCGAACA GATCTTCCGC CGCGAGAACG TCAACGCCGC CTATATCGAG
GGCGACGCCT TCCATCGCTA CAACCGGGTC GACATGCGCA CCCGGATGGC CGAGGAGGCC
GCGCTCGGCA ACAAGCATTT CAGCCACTTC AGCCCCGAGA CCAACCTGTT CGAGGAACTG
GAGACCACGT TCCGCGACTA CAGCACCACC GGCACCGGCA AGACCCGCTA CTACGTCCAC
GACGACAAGG AAGCCGCGAT CCACGGCGTC GAGCCGGGCA ATTTCACCGA CTGGCAGACG
CTGCCCGAGG GCTCCGACCT GCTGTTCTAC GAAGGCCTGC ACGGCGCGGT GATGACCGAG
AAGGTCAACG TCGCCCAGCA CGCCGACCTC AAGATCGGCG TCGTCCCGGT GATCAATCTG
GAATGGATCC AGAAGCTGCA CCGCGACCGC AGCGACCGCG GCTATTCCAC CGAGGCGGTC
ACCGACACCA TCCTGCGCCG GATGCCCGAC TACGTGCACT ACATCGTGCC GCAATTCGGC
GAGACCGACA TCAACTTCCA GCGCGTGCCC ACCGTCGACA CCTCGAACCC GTTCATCGCG
CGCTGGATTC CCACGCCCGA CGAATCCATG GTGGTGATCC GCTTCAAAAG CCCGCGCGGC
ATCGACTTCG CCTATCTGCT GTCGATGATC CAGGGCAGCT TCATGTCGCG CGCCAATTCG
ATCGTGATCC ACGGCTCCAA GCTCGACCTC GCGATGCAGC TGATCCTGAC GCCGTTGATC
ATGCAGCTGA TCGAACGCAA GCGCGGCGCC AAATAG
|
|---|
| Protein sequence | MSRKHPIISI TGSSGAGTTS VKRTFEQIFR RENVNAAYIE GDAFHRYNRV DMRTRMAEEA
ALGNKHFSHF SPETNLFEEL ETTFRDYSTT GTGKTRYYVH DDKEAAIHGV EPGNFTDWQT
LPEGSDLLFY EGLHGAVMTE KVNVAQHADL KIGVVPVINL EWIQKLHRDR SDRGYSTEAV
TDTILRRMPD YVHYIVPQFG ETDINFQRVP TVDTSNPFIA RWIPTPDESM VVIRFKSPRG
IDFAYLLSMI QGSFMSRANS IVIHGSKLDL AMQLILTPLI MQLIERKRGA K
|
|---|
| |