| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2895 |
|---|
| Symbol | |
|---|
| ID | 3971923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3150022 |
|---|
| End bp | 3151407 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637926008 |
|---|
| Product | ribulose bisphosphate carboxylase |
|---|
| Protein accession | YP_532762 |
|---|
| Protein GI | 90424392 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.109037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGT CGAACCGTTA CGCCAACCTC AACCTGACCG AGAAGGACCT GATCGCGGGC
GGACGGCACG TGCTGTGCGC CTACATCATG AAGCCGAAGG CCGGGTTCGG AAACTTCCTG
CAGACCGCGG CGCATTTCGC CGCGGAATCC TCCACCGGCA CTAACGTCGA GGTCTCCACC
ACCGACGATT TCACCCGCGG CGTCGATGCG CTGGTCTATG AGATCGACGA AGCCAAGCAG
CTGATGAAGA TCGCCTATCC GATCGATCTG TTCGACCGCA ACATCATCGA CGGCCGCGCC
ATGATCGCTT CGTTCCTGAC GCTGACGATC GGCAACAACC AGGGCATGGG CGACGTCGAA
TACGCCAAGA TGTACGACTT CTACGTGCCG CCGGCCTATC TCAAGCTGTT CGACGGCCCG
TCGACCACGA TCAAGGATCT GTGGCGCGTG CTCGGCCGCC CGGTGGTCGA CGGCGGCTTC
ATCGTCGGCA CCATCATCAA GCCGAAGCTC GGGCTGCGGC CGCAGCCGTT CGCCAATGCC
TGCTACGATT TCTGGCTCGG CGGCGACTTC ATCAAGAACG ACGAGCCGCA GGGCAACCAG
GTGTTCGCGC CGTTCAAGGA AACCGTGCGC CTGGTCAATG ACGCGATGCG GCGGGCTCAG
GACAAGACCG GGCAGCCAAA ACTGTTCTCG TTCAACATCA CCGCCGACGA TCATCACGAG
ATGGTCGCGC GCGGCGAATA CATTCTGGAG ACCTTCGCCG ACAACGCCGA CCACATCGCG
TTCCTGGTCG ACGGCTACGT CGCCGGCCCC GCCGCGGTCA CCACCGCGCG GCGCAGATTC
CCGAAGCAGT ATCTGCACTA CCACCGCGCC GGCCATGGTG CGGTGACCTC GCCGCAGGCC
AAACGCGGCT ACACCGCCTT CGTACTGTCG AAGATGGCGC GGCTGCAGGG CGCCTCCGGC
ATCCACACCG GCACCATGGG CTTCGGCAAG ATGGAAGGCG AAGCCGCCGA CCGCGCAATG
GCCTATATGA TCACCGAGGA CAGCGCCGAC GGGCCGTATT TCCACCAGGA ATGGCTCGGC
ATGAACCCGA CCACGCCGAT CATCTCCGGC GGCATGAACG CGCTGCGGAT GCCGGGCTTC
TTCAAGAACC TCGGCCATTC CAACCTGATC ATGACCGCGG GCGGCGGCGC CTTCGGCCAT
ATCGACGGCG GTGCCGCCGG TGCGAAGTCG CTGCGGCAGG CCGAGCAGTG CTGGAAGGAG
GGCGCCGATC CGGTGGCTTT CGCCAAGGAG CATCGCGAAT TCGCCCGCGC CTTCGAGAGC
TTCCCGCACG ACGCCGACGC GCTTTATCCG AACTGGCGCG GCCAGCTCGG GCTCGCCGCC
GCCTGA
|
|---|
| Protein sequence | MDQSNRYANL NLTEKDLIAG GRHVLCAYIM KPKAGFGNFL QTAAHFAAES STGTNVEVST
TDDFTRGVDA LVYEIDEAKQ LMKIAYPIDL FDRNIIDGRA MIASFLTLTI GNNQGMGDVE
YAKMYDFYVP PAYLKLFDGP STTIKDLWRV LGRPVVDGGF IVGTIIKPKL GLRPQPFANA
CYDFWLGGDF IKNDEPQGNQ VFAPFKETVR LVNDAMRRAQ DKTGQPKLFS FNITADDHHE
MVARGEYILE TFADNADHIA FLVDGYVAGP AAVTTARRRF PKQYLHYHRA GHGAVTSPQA
KRGYTAFVLS KMARLQGASG IHTGTMGFGK MEGEAADRAM AYMITEDSAD GPYFHQEWLG
MNPTTPIISG GMNALRMPGF FKNLGHSNLI MTAGGGAFGH IDGGAAGAKS LRQAEQCWKE
GADPVAFAKE HREFARAFES FPHDADALYP NWRGQLGLAA A
|
|---|
| |