Gene RPC_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2893 
Symbol 
ID3971921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3148237 
End bp3149046 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID637926006 
Producthypothetical protein 
Protein accessionYP_532760 
Protein GI90424390 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.135065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.152358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCTC CGCCCAACAC CCCAGAGCAT GATCCCGTCC CGGTCCGCCA CCGCATGCTG 
GAACGCATCG CCCATGTGGC GCTCGAGGTC GGCCGCATCC TCAGCCAGAA CGGGGCGTCG
GTGCGGATCA CGGATGAGGG CGCGCGGATG ATCGCGGCGG GGCTGGGCGT CGAAGTGCTG
GGCACGCGCA CCGGCTATGC CTCGTTCGAG ATCACGGTGG GTACCGGTCG CAACACCATC
ACCCGGATGA TCCAGGTCGG TCCGCACGGC GTTAACCACC GGCTGGACTT CGCGGTGCGC
CAATTGGCGG TCCGGGCCTC GGCCGGCGGC ATGACGCCGG AGGAGATCGA GAGCGAACTG
GCAAGGCTGC AGCGCGAGAC ACCGCGGCAT CCGCCCTGGT TGGTCGCAGT GGCGACCGGG
GCGGCGTGTG CGGCGTTCGG CCGGCTGCTC GGCGCCGACT GGCCGGCGTT CCTGCCGATG
CTCGCCGCGG CGGGGATCGG CCAGGGGCTG CGCCATCTGC TGATCGGCCG CCGCCTCAAT
GTCTTCGTCA TCGCCGCGAT CGTCGGCTGC GTCGCCGCGA CGCTCGGCGG GCTCGGCGCC
CGGCTCGCCG GCAGCGCCAC CATCGAACTG GCGATGATGG CGTCGATCCT GCTGCTGGTG
CCCGGCGTGC CGTCGACCAA CGCCCAGACC GACATCATGG ACGGCTATCC GACGATGGGC
AGCGCACGCG CGGTGTGGGT GATCATGATC ATGGTGTTCG CGGTGACCGG GCTGTGGATC
GCCGAATTCC TGCTGAGGAT CCACCCGTGA
 
Protein sequence
MMSPPNTPEH DPVPVRHRML ERIAHVALEV GRILSQNGAS VRITDEGARM IAAGLGVEVL 
GTRTGYASFE ITVGTGRNTI TRMIQVGPHG VNHRLDFAVR QLAVRASAGG MTPEEIESEL
ARLQRETPRH PPWLVAVATG AACAAFGRLL GADWPAFLPM LAAAGIGQGL RHLLIGRRLN
VFVIAAIVGC VAATLGGLGA RLAGSATIEL AMMASILLLV PGVPSTNAQT DIMDGYPTMG
SARAVWVIMI MVFAVTGLWI AEFLLRIHP