| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2891 |
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| Symbol | |
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| ID | 3970041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3145365 |
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| End bp | 3146885 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926003 |
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| Product | putative Omp2b porin |
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| Protein accession | YP_532758 |
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| Protein GI | 90424388 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0130237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0599133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGG TTAAGAGCCT TATTCTCGGC TCAGCGGCGG CCCTGGTCGC GATTAGTGGA
GCCCAGGCCG CCGATCTTCC GTTGAAGGCC AAAGCGGTCG AATACGTGAA GGTCTGCTCG
CTGTACGGCG CAGGTTTCTA TTACATCCCC GGCACTGACA CCTGCATCAA GCTCGGCGGC
TATCTGCGCG CCGACCTCAC GCTCAACGGT TCAGCCGGCT TCGACGCGCC CGCCTGGAAC
GGCAATTCGG GTCAGCAGAA TCGTCTGAAG AACGACTTCA TCTTCCGCTC CCGCCAGGAC
ATCAACATCG ACACCCGCAC CGCGACCGAA TACGGCGTGG TCCGCACCTA CTTCGATGCG
ATCTTCCAGT GGACGACCGG CACCGATACG ATCGCCGGTG GCTCGCTCGG CGTGTACTAC
GCCTTCGTCC AGTTCGCCGG CTTCACCTTC GGTAAGGCGG TGTCGCAGTT CGACGCGCCG
TGGTCGGGCT ATCCCGGCAA CAACACGTCC TACCTGCTCG GCGGCTACGA CGACGTCACC
GGCATCAACC AGATCTCCTA CACCGCGCAG TTCGGCAATG GCGTGTCGGC CGCGATCTCG
TTGGAAGATC CCTACGCCTA TTTGCAGTCG GCGCTGTATA ACACCTCTTT TGCGGCGTCC
GGTACGACCG GATTCGCCGG TGGTGTGGCC GGAGCCGCCA CGTTCTACGG GGCAAACTCC
TACGCCGGCA CTCAGATTCC CGACATCGTC GGTCAATTGC GTGTCGACCA GGCCTGGGGG
TTGTTCCAAC TCTCGGCGGC GGCGCACCAG ATTCGCGCCA GTTACTACAA TCCGGGTGAT
GAAACCACCG GTCACCCCGG CGACAAGTGG GGCTACGCCG TGCAGGCCGC CCTGTCGATC
AAGAACATTC CGACCGGTCC CGGCGACAGC ATCAACGTGA GCGCCGGCTA TGCGGATGGG
GCCAGCCGCT ATTTGATCGG CGGCGTGACG GGCAACAGCT TCGCAATGTT CGGCGGCACC
GGAGCTCCCG GCGCCTATCA GAGCTTAGCC TTCGCGGCGT CGTCGGACGG CGTGTTCGCC
GGCACCTCGT CGGCCAACGG CACCGGCATC CAGACCACGA CGGGCTGGGC GCTTCGTGGC
GCGTTCAACC ACAACTGGAG CCCGTACTGG TCGTCCTCGC TGTTCGGTTC GTACACCGCG
ATCAACTACA ACGGCACCGC GACCGCTCTG ATCTGCGGTG GCACTGGCTT CGGTCTGTTG
AATATCACAG GTTACACTCC GGTCGCGGGC TCCGGCTATA GCTGCAACCC CGACTTCAAC
ATCGCGCAGG TGGGTCTCGT CACCCGCTGG ACCCCGGTCA GGAACCTGAC GCTGTCCGGC
GAAGTTCTGT ACACCAATCT CGACCAGAAC TTTTCCGGTG TCGTTGCCCT TCCTGCTGTC
GGAACCAAGC CGGCTCGGAG CTACGAGTTG AAGGACCAGG ACACCTGGAC CGGCAACCTG
CGCATTCAGC GTAACTTCTG A
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| Protein sequence | MKMVKSLILG SAAALVAISG AQAADLPLKA KAVEYVKVCS LYGAGFYYIP GTDTCIKLGG
YLRADLTLNG SAGFDAPAWN GNSGQQNRLK NDFIFRSRQD INIDTRTATE YGVVRTYFDA
IFQWTTGTDT IAGGSLGVYY AFVQFAGFTF GKAVSQFDAP WSGYPGNNTS YLLGGYDDVT
GINQISYTAQ FGNGVSAAIS LEDPYAYLQS ALYNTSFAAS GTTGFAGGVA GAATFYGANS
YAGTQIPDIV GQLRVDQAWG LFQLSAAAHQ IRASYYNPGD ETTGHPGDKW GYAVQAALSI
KNIPTGPGDS INVSAGYADG ASRYLIGGVT GNSFAMFGGT GAPGAYQSLA FAASSDGVFA
GTSSANGTGI QTTTGWALRG AFNHNWSPYW SSSLFGSYTA INYNGTATAL ICGGTGFGLL
NITGYTPVAG SGYSCNPDFN IAQVGLVTRW TPVRNLTLSG EVLYTNLDQN FSGVVALPAV
GTKPARSYEL KDQDTWTGNL RIQRNF
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