Gene RPC_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2883 
Symbol 
ID3970033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3135044 
End bp3135973 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID637925995 
Producthypothetical protein 
Protein accessionYP_532750 
Protein GI90424380 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.744665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0424383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAA CCTTTGGCAT GGCTGGTCTT GCAGCGTTGT TGGTCGCCCC GTTGATCGCG 
GTGGCGCCGC CGGCGCAGGC GCAGATCGGC AACATCTTTT CCGATCCGCC GCCGCGGCCG
CCCGGAAGTG TGCCGCGCGG CGGACCCTAC GACGACGAGG AAGAGGTGCC CGACCTGCCG
CAGCAGGGCC GGCTGTTGCC GACCCCGAAC CGGCCGCTGC CGGGGCAGGG CGCGCCGCCG
CCCGGACCGG TGCAGTCGCA GCCGCTGCCG CCGCCGCCCG GCACCACCGT GATCCCGCAA
AACCCGCCGG CCAGCGCCGC GGTGCCGCCT GCGCAGCCGT CTCCGGGTGT TGCCGCGGCC
CCTCCGGCCG CCAATCCGTT GCCGGGGCAA GCGCCGGGAC AGCGTCCTGC GCCCAAGACC
GCGCCGCCGT CGCCGGCGAC GCTGCAGCCC GGCGACGAGG TGGTCACCGA GCCGCCGGCG
CAGAAGATCG TCAACAAGAA GGCGAGCTTC TCCGGGCTCG ACAAGATCAC CGGGCGGATC
ATCAATTTCG ACGCCGACAT CGGCGAAACG GTGCAGTTCG GCGCGCTGCG GGTGAAGACC
GACGCCTGCT ACACCCGCCC GGCGACCGAA GCCGCCAACA CCGACGCCTT CGTCGAAGTC
GACGAGATCA CGCTGCAGGG CGAGGTGAAA CGGATCTTTT CCGGCTGGAT GTTCGCGGCG
AGCCCGGGGC TGCACGGCGT CGAGCACCCG ATCTACGATA TCTGGCTGAC CGACTGCAAA
GGCCCGGAGA CCACCGTGGT GGCGGCACAG CCCGACGCCA AGCCGGTGGC GGCCCAGCCG
GCGCAGAAAC GCGCCGCGCC GAGACAGCCG CGTCCGCTGC CGCCGCCGCA GGTGTTTCCC
TACAACCCGC TGCCGCCGTA CCGGCAGTAG
 
Protein sequence
MFRTFGMAGL AALLVAPLIA VAPPAQAQIG NIFSDPPPRP PGSVPRGGPY DDEEEVPDLP 
QQGRLLPTPN RPLPGQGAPP PGPVQSQPLP PPPGTTVIPQ NPPASAAVPP AQPSPGVAAA
PPAANPLPGQ APGQRPAPKT APPSPATLQP GDEVVTEPPA QKIVNKKASF SGLDKITGRI
INFDADIGET VQFGALRVKT DACYTRPATE AANTDAFVEV DEITLQGEVK RIFSGWMFAA
SPGLHGVEHP IYDIWLTDCK GPETTVVAAQ PDAKPVAAQP AQKRAAPRQP RPLPPPQVFP
YNPLPPYRQ