Gene RPC_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2871 
Symbol 
ID3970060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3124348 
End bp3124788 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID637925983 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_532738 
Protein GI90424368 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.281893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.20072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC CTGTTACCAT CATCATGATC GAGGACGACG AGGGCCACGC CCGGCTGATC 
GAGCGCAACA TCCGCCGCTC CGGCGTCAAC AATGAAATTA TTCCGTTCAC CAACGGGACA
GCCGCGCTGG ATTACCTGTT CGGGGCCGAC GGCAGCGGCA TCGAGCACAA GGGCCGCGCG
CTGTTGATCC TGCTCGACCT CAACCTGCCG GACACCTCCG GCATCGATAT TCTGCGCCGG
GTCAAGGAGA ACGACCATCT CAAATGCACC CCGGTCGTGG TGCTGACCAC CACCGACGAC
GCCCACGAAA TCAAGCGCTG CTACGAACTT GGGTGTAATG TCTACATTAC CAAACCGGTC
AATTACGAGA GCTTCGCCAA CGCCATCCGC CAGCTCGGGC TGTTCTTCTC CGTGATCCAG
GTGCCTGAAA CCATCGCATG A
 
Protein sequence
MSKPVTIIMI EDDEGHARLI ERNIRRSGVN NEIIPFTNGT AALDYLFGAD GSGIEHKGRA 
LLILLDLNLP DTSGIDILRR VKENDHLKCT PVVVLTTTDD AHEIKRCYEL GCNVYITKPV
NYESFANAIR QLGLFFSVIQ VPETIA