Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2849 |
Symbol | |
ID | 3970077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3096092 |
End bp | 3097459 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925961 |
Product | peptidase M23B |
Protein accession | YP_532716 |
Protein GI | 90424346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.649835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACC GTACAGGTCC TTATTCCGAA TCCCTGCAGC ACCACGCCCA CGATCACGGA CGAGCCCAAC CCCGGCGCCC CGCCCCCGCT CAGCAGCAGC CCCGTCCGCA ACCGGCAAAG AACGGCTACG CCCTGGTGCA TGCCGGCCGG CAGGTGCGGT TCGGGCCGGT GGTGTTCTGG ATCGTGGTCG GCAGCGTGGT GGCGCTGGGC GCCTGGTCGG CGGCGACGGC GACCTATTTC GCATTCCGCG ACGACGTGCT GACAAGGCTG ATCGCCCGCC AGGCCGAGAT GCAATACGCC TATGAGGACC GCATTGCCGA GCTACGCGCC AAGGTCGACC GCACCACTAG CCGGCAATTG CTCGACCAGG AACAGTTCGA CCAGAAGCTC GACCAGGTGA TGCGTCGCCA GAGCCTGCTG GAGTCGCGCG CCACCGCGCT CAGTGGCCTG CCCGACGTCG CGGTGACCGG CTCGATCAAG CCGCAACGCG GCGCCGCTTC AGACATCGGC ACCTCCTCGG GGATTCCGAA GCCGTCGCCG ATCAGCAACA CCGTAATCTT CGTAGCGCCG CCGGACCGCG AAGCCCGGCT GGAATCCCGC ACCCCGCAGA TCGCCGCGCC GCCGCTCAAC CAATATGCCA AGAACCAGGG CGTCGATAAT GTGATCGGCA AGCTGGAGCG CTCGCTCGAC CAGGTCGAGA CCAAGCAGAT CGCGGTGCTC GGCTTCGTCG AGGAAAGCTT CGATTCCCGC GCCCGCAGGA TGCGTGGCGT GCTCAGCGAT CTTGGGCTCG ACGTCGCGCA GATGGAGGCC TCCGCGCCGC GCGGCGGCAT GGGCGGGCCG TTCGTGCCGC TGAAACCGCC GGCGGCGGGC TCCGGCGCGT TCGAACGCCA GCTCTATCGG ATCAACATCA GCCGCGCCCA GGTCGAACGG CTGAACCGCA CGCTGTCGCT GGTGCCGTAT CGCAAGCCGG TGATCGGCGA AGTGGAATTC ACCTCGGGCT TCGGGGTGCG CACCGATCCG TTCCTCGGTC GCCCGGCGAT GCATACCGGG TTGGATTTCC GCGCCGCGAT GGGCGATCCG GTGCGCGCCA CCGCCAACGG CAAGGTGACC TCGTCGGGCT GGGCCGGCGG CTACGGCCGC ATGATCGAAG TCGACCATGG CAACGGCCTC GCCACCCGCT ACGGCCATCT GTCGGAGATC AACGTGAAAG TCGGCGATGC GATCAAGATC GGGCAAGTCA TCGGCGAGGT CGGCTCGACC GGCCGCTCCA CCGGCCCGCA TCTGCATTAC GAAACCCGCA TCGACGGCGA AGCGGTCGAC CCGCAGAAAT TTTTGCGCGC GGGGGTGAGG TTGGCGGGGG CGGGTTAG
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Protein sequence | MSYRTGPYSE SLQHHAHDHG RAQPRRPAPA QQQPRPQPAK NGYALVHAGR QVRFGPVVFW IVVGSVVALG AWSAATATYF AFRDDVLTRL IARQAEMQYA YEDRIAELRA KVDRTTSRQL LDQEQFDQKL DQVMRRQSLL ESRATALSGL PDVAVTGSIK PQRGAASDIG TSSGIPKPSP ISNTVIFVAP PDREARLESR TPQIAAPPLN QYAKNQGVDN VIGKLERSLD QVETKQIAVL GFVEESFDSR ARRMRGVLSD LGLDVAQMEA SAPRGGMGGP FVPLKPPAAG SGAFERQLYR INISRAQVER LNRTLSLVPY RKPVIGEVEF TSGFGVRTDP FLGRPAMHTG LDFRAAMGDP VRATANGKVT SSGWAGGYGR MIEVDHGNGL ATRYGHLSEI NVKVGDAIKI GQVIGEVGST GRSTGPHLHY ETRIDGEAVD PQKFLRAGVR LAGAG
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