Gene RPC_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2848 
Symbol 
ID3970076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3095464 
End bp3096000 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID637925960 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_532715 
Protein GI90424345 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.114974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCGG CGGGTGCCAA ACCGGTTGTC GCTGCGCCGG TCGTCGAAGC GCCGCCGCGG 
AGTAGCAAGG GCGTCCTTGC AGAGGGGCAC GCAGCACCGG CCTTCGAACT GCCGCGCGAC
GGCGGCGGCA TGGTATCTTC GCACAGCTTT GCCGGACGCA AGTTGGTGGT TTTCTTTTAT
CCCCGCGCCA GCACCCCGGG CTGCACCAAA GAGGCGATCG ACTTCACCCG ATTGGCCGAC
GCCTTCGCGA CCGCCGGGAT CGGCGTGCTC GGCATCTCCG CCGACAATCT GAAGGCCCAG
GATGCATTTC GCGACAAGTA CCAACTGACC ACGCCGCTGT TGTCCGACGA GACCCATCAG
ATCCTCGAAG CGTATGGCGT CTGGGGCGAA AAATCGATGT ACGGCAAGAT CTTTCAAGGC
ATTCTTCGCA CCACGGTGCT GATCGGCAAG GACGGCCGCG TCGGCAAGAT CTGGCGCAAC
GTCAAGGTTG ACGGCCATGC CGACGAGGTG CTGGCGGCAG CGATCGAATT GGAGTGA
 
Protein sequence
MEAAGAKPVV AAPVVEAPPR SSKGVLAEGH AAPAFELPRD GGGMVSSHSF AGRKLVVFFY 
PRASTPGCTK EAIDFTRLAD AFATAGIGVL GISADNLKAQ DAFRDKYQLT TPLLSDETHQ
ILEAYGVWGE KSMYGKIFQG ILRTTVLIGK DGRVGKIWRN VKVDGHADEV LAAAIELE