Gene RPC_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2843 
Symbol 
ID3970071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3085806 
End bp3086453 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID637925955 
Producthypothetical protein 
Protein accessionYP_532710 
Protein GI90424340 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0732715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TTATTTTCAC CGGTCCCGCA GGTCGATTGG AAGGCCGCTA TCATCCGGCC 
AAGCAGAAGA ATGCGCCGAT CGCCATGGTG CTGCATCCGC ATCCCCAGTT CCACGGCACC
ATGAATCACC AGATTATCTA CCAGTGCTAT TACGCTTTCG TGCATCGCGG CTTTTCGGTG
CTGCGGTTCA ATTTCCGCGG CGTCGGCCGC AGCCAGGGCT CGTTCGACCA CGGCACCGGC
GAATTGTCCG ATGCCGCCTC GGCGCTGGAT TGGGCGCAGA CCATCAATCC GGAAGCCCGC
GCCTGCTGGG TCGCCGGCTT CTCGTTCGGC GCCTGGATCG GCATGCAGCT TCTGATGCGC
CGCCCCGAGG TCGAAGGCTT CATCTCGATC GCGCCGCCGG CCAACCTCTA CGACTTCTCG
TTCCTGGCGC CCTGCCCGTC CTCGGGCCTG ATCGTACATG GCGAAAAGGA CGCCGTGGTG
CCGCCGAAGG ACGTCAACAC CCTGGTCGAA AAGCTGAAGA CCCAGAAGGG CATCGTCATC
GACCAGCACA TCATCCCCGG CGCCAACCAC TTCTTCGACG GCAAATTGCA GCCGTTGATG
GAATCGGTCA CCGGCTATCT CGACATGCGG CTCGCCAACG TGCGGTGA
 
Protein sequence
MPEVIFTGPA GRLEGRYHPA KQKNAPIAMV LHPHPQFHGT MNHQIIYQCY YAFVHRGFSV 
LRFNFRGVGR SQGSFDHGTG ELSDAASALD WAQTINPEAR ACWVAGFSFG AWIGMQLLMR
RPEVEGFISI APPANLYDFS FLAPCPSSGL IVHGEKDAVV PPKDVNTLVE KLKTQKGIVI
DQHIIPGANH FFDGKLQPLM ESVTGYLDMR LANVR