| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2837 |
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| Symbol | |
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| ID | 3970065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3078486 |
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| End bp | 3079733 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925949 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_532704 |
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| Protein GI | 90424334 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00234776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC ATCCCGCGGT TTCCAATGGA AGCTATGACG TCGCGCGTGT GCGCGAGGAT
TTCCCCGCGC TGGCGCTCAA GGTCTATGGC AAACCGCTGA TCTATCTCGA CAACGCCGCC
TCGGCGCAGA AGCCGCGGGT GGTGCTGGAT CGCATGACGC AGGCCTATGA GAACGAATAC
GCCAACGTGC ATCGCGGGCT GCATTATCTC GCCAACGCGG CGACCGAGGC CTATGAGGGC
GGCCGCGCGC GGGTCACCAG CTTCCTCAAC GCCAGGCGGC CGGAAGAGAT CATCTTCACC
CGCAACGCCA CCGAGGCGAT CAACCTCGTG GCGTCGTCGT GGGGCGCGCC CAATATCGGC
GAGGGCGACG AGATCGTGCT CTCGATCATG GAGCACCATT CCAACATCGT GCCGTGGCAT
TTCCTGCGCG AACGCCAGGG CGCGGTGATC AAATGGGCGG AGGTCGACGA CGACGGCAAC
TTCCTGCTGG AAGAATTCGA AAAGCAGCTG ACGGCGAAGA CCAAGCTGGT CGCGATCACC
CAGATGTCGA ACGCGCTCGG CACCGTGGTG CCGGTCAAGG AGGTGGTGCG GATCGCGCAC
GCCCGCGGCA TTCCGGTCTT GGTCGACGGC AGCCAGGCCG CGGTGCATAT GGCGATCGAC
GTCCAGGACA TCGACTGCGA CTTCTACGTC ATGACCGGCC ACAAGGTTTA TGGCCCGACC
GGGATCGGCG TATTGTACGC CAAATACGAT CACCTGGTGG CGATGCGGCC GTATTGCGGC
GGCGGCGAAA TGATCCGCGA AGTGTCGCGC GACGTCGTGA CTTATGGCGA TCCGCCGCAC
AAATTCGAGG CCGGCACGCC GGCGATCGTC GAGGCGGTGG GATTGGGCGC CGCGATCGAC
TACGTCAATT CGATCGGCAA AGCGCGGATC GCGGCGCACG AGCACGATCT GTTGGACTAC
GCCCAGGCGC AGCTGCGCGA GATCAATTCG GTGCGCATCA TCGGCACCGC CCGCGACAAG
GGGCCGGTGA TCTCGTTCGA GATGAAGGGC GCGCATCCGC ACGACATCGC CACGGTGATC
GACCGCTCCG GCATCGCGGT GCGCGCGGGA ACTCACTGCG TGATGCCGCT TTTGGAGCGA
TTCCAAGTCA CCGCGACGTG TCGGGCCTCG TTTGGGATGT ATAACACCCG CGAGGAAGTC
GACCAATTCG TACAGGCGCT GATCAAGGCG CGGGATTTGT TCTCATGA
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| Protein sequence | MTTHPAVSNG SYDVARVRED FPALALKVYG KPLIYLDNAA SAQKPRVVLD RMTQAYENEY
ANVHRGLHYL ANAATEAYEG GRARVTSFLN ARRPEEIIFT RNATEAINLV ASSWGAPNIG
EGDEIVLSIM EHHSNIVPWH FLRERQGAVI KWAEVDDDGN FLLEEFEKQL TAKTKLVAIT
QMSNALGTVV PVKEVVRIAH ARGIPVLVDG SQAAVHMAID VQDIDCDFYV MTGHKVYGPT
GIGVLYAKYD HLVAMRPYCG GGEMIREVSR DVVTYGDPPH KFEAGTPAIV EAVGLGAAID
YVNSIGKARI AAHEHDLLDY AQAQLREINS VRIIGTARDK GPVISFEMKG AHPHDIATVI
DRSGIAVRAG THCVMPLLER FQVTATCRAS FGMYNTREEV DQFVQALIKA RDLFS
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