Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2822 |
Symbol | |
ID | 3970089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3064362 |
End bp | 3064964 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925934 |
Product | hypothetical protein |
Protein accession | YP_532689 |
Protein GI | 90424319 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACG CCGCCGATCA CGACACGCTG AAATTCTATC GCGCCAATGC GGAGACCTAT GCGCAGCGTC AGCCGCGCGG CACCGAGCAG ATGACGGGAT TCCTGGCGGC GCTGCCGCCG GGCGGATCCA TCCTCGAACT CGGCTGCGGC GCCGGCTATC AGGCGGCGCA GATGCTGGCC GCCGGCTTCG ATGTGCATCC GACCGACGGC TCGGCGGAAA TGGCCGCGCA AGCGCAGCAG AGACTCGGCC GCGAGGTCAG AACCATGCTG TTCCACGAAC TCGACGCGGA CGCTGCGTAT GACGGGGTGT GGGCCTATGC CTGCCTGTTG CACGTGCCGC GCGATGAGCT GGCGTCCGTG TTGTCGCGGG TCTGGCGCGC GCTGAAGCCC GGCGGCTGGT TTTATGCCAG CTTCAAATCC GGCGAGGGCG AGGGTCGCGA CAAGCTTGCG CGCTACTACA ACTATCCGTC GGAGGAGTGG CTTCGCGCGC GCTATGCCGA GGCCGGCGGC TGGGCATCGA TCGACGTCGC GCGCGACCAA GGCAAAGGGT TCGACGGCGA GCTGGCGAGC TTCCTGCACG TCATGGTGCA GAAGCAATCG TAG
|
Protein sequence | MSDAADHDTL KFYRANAETY AQRQPRGTEQ MTGFLAALPP GGSILELGCG AGYQAAQMLA AGFDVHPTDG SAEMAAQAQQ RLGREVRTML FHELDADAAY DGVWAYACLL HVPRDELASV LSRVWRALKP GGWFYASFKS GEGEGRDKLA RYYNYPSEEW LRARYAEAGG WASIDVARDQ GKGFDGELAS FLHVMVQKQS
|
| |