| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2819 |
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| Symbol | |
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| ID | 3970086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3061264 |
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| End bp | 3063069 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925931 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_532686 |
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| Protein GI | 90424316 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0247159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA TGATCACCGA AACCAAGCCT GCCCCGGGCT TCGACCCCGA GGCTTTCGCG
CTCAATCTGG CGCGCGCCAT GGAGAACAGC GGCAAGGCGC TGGCAACTTA TTTAAAGCCG
CGTGACAGCG CCGAGCCGCT CGACAAGCCG CCGGCGGAAC TCACCGAAGT GGTGAAGACG
CTGTCGGCGG TGGCGAACTA CTGGTTGTCC GACAAGGACC GCGCCACCGA GATCCAGACC
AAGCTCGGCA AATCCTATCT CGATCTGTGG GGCGTCGCGA TGCGGCGGAT GGCCGGCGAA
GACGCCGCCG CCGTCATCGA AGTGCCGCCG CGCGACAAGC GCTTCAGCGC CCCGGAATGG
AAGTCCAGCC CGTTGTTCGA TTTCCTGGTG CAGGCCTATC TGTTGACCAC GCAATGGGCC
TACCAGCTGG TGCGCGACGC CGAAGACATC GACCCGCATA CCAAGAAGAA GGCCGAGTTC
TACATCCAGC AGATCACCAA CGCGCTGGCA CCGTCGAATT TCGTGCTGAC CAATCCGGAG
GTGCTGCGCG AGACGCTGGC CTGCAACGCC GACAATCTGG TGCGCGGCAT GACCATGCTG
GCCGAGGACA TCGCGGCGGG CAACGGCCAG TTGCGGATCC GGCAGTCCGA CCCGGCCAAT
CTGGAGGTCG GCGTCAACAT GGCGACGACG CCCGGCAAGG TGATCTTCCA GAACGAATTG
ATGCAGCTGA TCCAATATCA GCCGACCACC GAGAACGTGC TGCGCACGCC GCTGTTGATC
GTGCCGCCGT GGATCAACAA GTATTACATT CTCGACCTCA AGCCGGAAAA ATCCTTCGTC
AAATGGTGCG TCGACCAGGG CGTCACGGTG TTCGTGATCT CCTGGGTCAA TCCCGACAAG
AGCCTCGGCC ACAAGACCTT CGACGACTAC ATGAAACAGG GTCCGCTGAC CGCGATGGAC
GTCATCGAAC AGGTCACCGG CGAGATGAAG GTGCACACCA TCGGCTACTG CGTCGGCGGC
ACCCTGCTCG CCGCGACGCT GGCCTGGCTC GCCGAAAAGC GCCGGGTCCG CGTCACCTCG
GCGACGCTGC TCACCACCCA GGTGGATTTC ACCAATGCCG GCGATCTCTT GGTGTTCGTC
GACGAGGATC AGATCGCCGC GTTGGAGCGC GAGATGCAGG CCAGCGGCGT GCTGGAAGGC
TCGAAGATGG CGATGGCCTT CAACATGCTG CGCTCCAACG ACCTGATCTG GTCCTATGTG
GTCAATAACT ATCTGAAGGG CCAGCCGCCG TCGGCGTTCG ACCTGTTGCA CTGGAACTCC
GATTCGACGC GGATGCCGGC GGCGAACCAT TCCTATTATT TGCGCAACTG CTATCTCGAC
AACCGGCTGT CGGCCGGCAC CATGGTGCTG GACAACACCC TGCTCGACCT TTCCAAGGTC
AAGGTGCCGA TCTACAACCT CGCCACCCGC GAGGACCACA TCGCGCCGGC GGACTCCGTG
CTGTACGGCT CGCAATTCTT CGGCGGCCCG GTGAAATACG TGCTGTCCGG CTCCGGCCAC
ATCGCCGGCG TGATCAACCC GCCGGCCGCG GGCAAGTATC AATATTGGAC CAACGAGGCC
AGCACGGCGT CGACCGTCGC CGAATGGATC AAGGGCGCGC AGGAGCACAA GGGCTCGTGG
TGGCCGGACT GGCGGCAATG GCTGACCGGC ATCGACCCCG AAGAAGTCCC GGCGCGCAGC
GTCGGCACCG AGGCCCTGCC GCCGCTCGAG GATGCGCCGG GCAGCTACGT CCGGGTGCGG
GCCTGA
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| Protein sequence | MSEMITETKP APGFDPEAFA LNLARAMENS GKALATYLKP RDSAEPLDKP PAELTEVVKT
LSAVANYWLS DKDRATEIQT KLGKSYLDLW GVAMRRMAGE DAAAVIEVPP RDKRFSAPEW
KSSPLFDFLV QAYLLTTQWA YQLVRDAEDI DPHTKKKAEF YIQQITNALA PSNFVLTNPE
VLRETLACNA DNLVRGMTML AEDIAAGNGQ LRIRQSDPAN LEVGVNMATT PGKVIFQNEL
MQLIQYQPTT ENVLRTPLLI VPPWINKYYI LDLKPEKSFV KWCVDQGVTV FVISWVNPDK
SLGHKTFDDY MKQGPLTAMD VIEQVTGEMK VHTIGYCVGG TLLAATLAWL AEKRRVRVTS
ATLLTTQVDF TNAGDLLVFV DEDQIAALER EMQASGVLEG SKMAMAFNML RSNDLIWSYV
VNNYLKGQPP SAFDLLHWNS DSTRMPAANH SYYLRNCYLD NRLSAGTMVL DNTLLDLSKV
KVPIYNLATR EDHIAPADSV LYGSQFFGGP VKYVLSGSGH IAGVINPPAA GKYQYWTNEA
STASTVAEWI KGAQEHKGSW WPDWRQWLTG IDPEEVPARS VGTEALPPLE DAPGSYVRVR
A
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