| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2812 |
|---|
| Symbol | |
|---|
| ID | 3970117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3052409 |
|---|
| End bp | 3053500 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_532679 |
|---|
| Protein GI | 90424309 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0873158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTT CGCTCTGGGA CAAGCTCGTC GCGCTGCTCA AGCTCGAATG GCACCATCTG
ACCACCATCA ACCCGAGCGA CCGGCCCTGG CAGATGCCGT TCGCAGCGGC CCTGGCGTCG
GGCGTGCCGC TGTTGATCGG CGCCTGGTTC GACCGCCTCG ACTACGGGCT GATCTCGTCG
CTCGGCGGGA TGGCCTTCAT CTATCTGCCG GCCACACCGC TGCATCACCG CATGGTATCG
CTGATGGCGG TCGGCTTCGG CATGACCGCC TGCTACGCCT TCGGCATCAT CGCGCACTTC
TTTCCGTTGC TGCTGACGCC GGTGCTGGGG CTGGTCGCCA TCCTGGTGTC GATGGTGTGC
CGGTTCTATC GCGTCGGCGT GCCCGGCAGC CTGTTCTTCG TGATGGCGGC CTCGATCGCC
GCCTATTCGC CGACCGAGGT GCTGCAGGTG CCGCTGAAGG TCGGGCTGCT GACCATGGGC
TGCCTGCTGG CGGCGTTGAT CGCTTTCATC TACAGCGTCG CGCTGCTGCG GCTGCGGGCG
TCGCAGCCGG CGGCGCCGCT GCCGCCGGCG ACCTTCGATT TCGTGGTGTT CGATTCGGTG
GTGATCGGGG TAGCCGTCGG CATCTCGCTG GCGCTGGCGC AGCTGCTGCA TCTCGAGCGG
CCCTATTGGG TGCCGGTGAG TTGCCTCGCG GTGATCCAGG GATTGTCGCT GCGCGCGGTG
TGGACGCGGC AATTGCATCG CGTGCTCGGC ACTGCGCTGG GGCTGTTGCT GGCCTGGATG
CTGTTGGCGC TGCCGCTGGA GAAATGGAGC ATCGCGCTGC TGGTGATCGC GCTCAGCTTC
GTCATCGAGA GCGCCGTGGT GCGGCACTAC GGCTTTGCGG TGATCTTCAT CACTCCGCTG
ACCATCTTCC TCGCCGACGC CGCCTCGCTC GGCCAAGGTA ACCCCAATGC GGTGATCGAG
GCGCGGTTGT TCGATACGCT GCTCGGCTGC GCGGTCGGGC TTGCCGGCGG CTTCTGCCTG
CACAGCCCAA AATTTCGCGA CGTGGTGGGC AAGCAATTGC GCCGGCTGAT CCCGGCGCGA
TTCGGGGTGT GA
|
|---|
| Protein sequence | MRRSLWDKLV ALLKLEWHHL TTINPSDRPW QMPFAAALAS GVPLLIGAWF DRLDYGLISS
LGGMAFIYLP ATPLHHRMVS LMAVGFGMTA CYAFGIIAHF FPLLLTPVLG LVAILVSMVC
RFYRVGVPGS LFFVMAASIA AYSPTEVLQV PLKVGLLTMG CLLAALIAFI YSVALLRLRA
SQPAAPLPPA TFDFVVFDSV VIGVAVGISL ALAQLLHLER PYWVPVSCLA VIQGLSLRAV
WTRQLHRVLG TALGLLLAWM LLALPLEKWS IALLVIALSF VIESAVVRHY GFAVIFITPL
TIFLADAASL GQGNPNAVIE ARLFDTLLGC AVGLAGGFCL HSPKFRDVVG KQLRRLIPAR
FGV
|
|---|
| |