| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2811 |
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| Symbol | |
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| ID | 3970116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3051192 |
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| End bp | 3052409 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925923 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_532678 |
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| Protein GI | 90424308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.119364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCGATTCCCC TGCCTGCCTC ACCCGCCGCG CCATGCTCGG CGCCGCCCTC
GCCGCGCTGC CGGCCGTGGC CTTCGCGGCC CCCGCGGGCT TTGCGGAGTG GCGCGACGGC
TTTCGCGCCA AGGCCCGCGC CAAGGGCATT TCCGACGAAA CCTATTCCCG GGTGATGGGA
TCGCTCGAGC CCGACATGAG CGTGTTCCGG CAGATGCAGA AGCAGCCGGA ATTCAACGAA
CAGCTCTGGC AATACATCAA CCGCCGGGTG TCGGACTGGC GCATCATCAA CGGCCGCGCG
GCCTTGAAGC AGCACGCCGC GTTGTTTTCC CGGATCGAGC GCGATTTCGG CGTCGAGCGC
GGCACGCTGT TGGCGCTGTG GGGCGTGGAA AGCGCCTATG GCGATCCTTT GGTGCAGCAG
AACCACATGC GCCCGGTGTT TCCGTCGCTC GCAGCTCTCG CCTGGAAAGA GCCGCGCCGC
CGCGTCTACT GGGAAGCCGA GTTGATCAAT GCCTTGAAGA TCGTCGATCG CGGCTGGTCG
ACGCCGCAGG AGATGCGCGG CTCCTGGGCC GGGGCGATGG GCCATACCCA ATGGATGCCG
GAAGTCTGGC TCAATGTCGG GATCGATTAC GACGGCGACG GCAAGGTGTC GCCGTTCGGA
CGGCCCGACG ACGCGCTCGG CTCCAGCGCC AAATTTCTGC TCAACCGCGG CAAGTATCAT
CGCGGCGAGC ATTGGGGCTA CGAGGTGCAG GGTCCCGGCC TCGCTGCCAG CGGCAGCCGG
AGCTACGCCG CATGGTCGCG CTCGGGCGTC GCCAGGATCG ACGGCGAGCC GTTTCCGCTG
CCCGACGCCA ACGCGCAGAT GTGGCAACCG GTCGAGGGCG GCCCGAAATT CCTGCTGGGG
CCGGATTTCT ACGCGGTGAG AAGCTATAAC CCGTCGATGA ACTACGCGCT GGCGATCTGC
CATCTCGGCG ACCGCATTCT CGGCGCGCCG CCGTTCCGGC AGCCGTTCCC CGGCTCGGAA
CGGGCGCTGA CTTTGGCCGA GGTGCAGGAG ATGCAGACCC GCCTCACCCG CGCCGGGTTT
GATACCGGCG GCACCGACGG CCGGGTCGGC AACGACACCA TGAAGGCGAT CCGCGACTAT
CAGAGCAAGA TCGGGCTGTC GCCGGCCGAC GGCTATGGCG GGTTGCAGGT TTTGGCGGCG
TTGCGGCAGG GCCGCTGA
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| Protein sequence | MTKTDSPACL TRRAMLGAAL AALPAVAFAA PAGFAEWRDG FRAKARAKGI SDETYSRVMG
SLEPDMSVFR QMQKQPEFNE QLWQYINRRV SDWRIINGRA ALKQHAALFS RIERDFGVER
GTLLALWGVE SAYGDPLVQQ NHMRPVFPSL AALAWKEPRR RVYWEAELIN ALKIVDRGWS
TPQEMRGSWA GAMGHTQWMP EVWLNVGIDY DGDGKVSPFG RPDDALGSSA KFLLNRGKYH
RGEHWGYEVQ GPGLAASGSR SYAAWSRSGV ARIDGEPFPL PDANAQMWQP VEGGPKFLLG
PDFYAVRSYN PSMNYALAIC HLGDRILGAP PFRQPFPGSE RALTLAEVQE MQTRLTRAGF
DTGGTDGRVG NDTMKAIRDY QSKIGLSPAD GYGGLQVLAA LRQGR
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