| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2808 |
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| Symbol | |
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| ID | 3970113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3047616 |
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| End bp | 3048668 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925920 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_532675 |
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| Protein GI | 90424305 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGAGA CCAGCCCGAT TTCGCCGTGG TGGACGCCAT CCCGCCACCT CGACCGCGCG
CCGTTCTTGC GGGCGCGGGC CGAAATCACC CGCGCCACCC GGCAATGGTT CGCCGATCGG
GGCTTTATCG AGGTCGAAAC CGGGATTTTG CAGGCCTCGC CCGGCAACGA GACCCATCTG
CACGCGCCGC GCACCGAACT GACCACCGGG TCCGGCGAGC GATTATGCCG CTATCTGCGG
ACCTCGCCGG AGTTCGCCTG CAAGAAGCTG TTGGCCGCCG GCGAACAAAA GATCGTCGAA
TTCGCCCGCG TGTTCCGCGA CCGCGAACGC GGCGACCTGC ATCTGCCGGA ATTCACCATG
CTGGAATGGT ACCGTGCCGG CGCGCCGTAT CAAGCGGTGG TCGACGATTG CGTGGCGGTG
ATCGGCGAAG CCGCGCGCGC GGCCGGCACA AGGCTGTTCG CGTTTCGCGG CCGGATCGCC
GATCCGTTCG CCGCACCGCA GTTGCTCAGC GTGGCGCAGG CCTTCCGCAG CTTCACCGAC
ATCGATCTGT TGGCCAGCAT CGGCGGCGGC GAACCCGACC GCGCGGCGCT GGCCGCGATG
GCGCAGCGCT GGGTGAAGGT CAGCGACGAC GACGACTGGT CGGACATCTT CAGCAAGATC
CTGGTCGAAC ATATCGAGCC CAATCTGGGG CAGGGGCAAT TGACCGTGCT GTGCGAATAT
CCGGCGCCGG AGGCCGCATT GGCGCGGACG CTGCCGTCCG ATCCGCGGGT CGCCGAGCGC
TTCGAGGTCT ATGCCTGCGG CGTCGAACTG GCCAACGGCT TCGGCGAATT GACCGACGCG
CAGGAGCAGC GCGCGCGCTT CACCAAGGCG ATGGACGAGA AACAGCGCCG CTACGGCGAG
CGCTATCCGC TCGACGAGGA GTTTCTCGAA GCGGTCGGGC AGATGCCCGA AGCCAGCGGC
GTGGCGCTCG GCTTCGACCG GCTGGTGATG CTGGCCGCCG GGGCGCGGCG GATCGACGAG
GTGGTGTGGA CGCCGCCGGC GGGCACGCCA TGA
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| Protein sequence | MDETSPISPW WTPSRHLDRA PFLRARAEIT RATRQWFADR GFIEVETGIL QASPGNETHL
HAPRTELTTG SGERLCRYLR TSPEFACKKL LAAGEQKIVE FARVFRDRER GDLHLPEFTM
LEWYRAGAPY QAVVDDCVAV IGEAARAAGT RLFAFRGRIA DPFAAPQLLS VAQAFRSFTD
IDLLASIGGG EPDRAALAAM AQRWVKVSDD DDWSDIFSKI LVEHIEPNLG QGQLTVLCEY
PAPEAALART LPSDPRVAER FEVYACGVEL ANGFGELTDA QEQRARFTKA MDEKQRRYGE
RYPLDEEFLE AVGQMPEASG VALGFDRLVM LAAGARRIDE VVWTPPAGTP
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