| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2797 |
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| Symbol | |
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| ID | 3970102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3039080 |
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| End bp | 3040183 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637925909 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_532664 |
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| Protein GI | 90424294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.798419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA GGGAGATCGC ATTATTCGGA CCCGCCATCG TCGCTTTGGC GCTCATGGTC
GGCGGCTGCG ATTCGGCCCT TCGCGAGCCC GCCAAGCGGG ACGTCGCCGC CGCTCCTCTC
CCAGTGATCG TCGCACCGGT GCGCTACCAG GACGGCGGCA GAACGCGGAC CTTCGCCGCC
ACGATCAGGC CGGCGATCGA AAGCGACCTC GGATTTCGGG TGAACGGCAA GGTGGCGCGG
CGGTTGGTGC GCAATGGCGA CCGCGTGCGC AAAGGCCAGA CGCTGCTTGA GCTCGATCCC
GACGATCTGC AGCTGCAGCG CGAGCAGGCC GAGGCGGAGG TGAAAGCCGC CACCACGAGC
CTGAGCCAGG CCGCGGCCGA CGAACGGCGC GCCATCGAAC TCCAGAGCAA GGGCTGGGCG
GCCAACACCA CGGTGGAGAA GGCGCTCGCC GCCGCGCAGG AGGCGCGCAG CCGATTGATC
CGCGCGCAAC GCGGGCTCGA CCTCGCAGCG CATTCGCTCG ACTACGCGAC GCTCGCCGCC
GAGGAGGATG GCGTCATCAC GGCGACGCCG GTCGAACCAG GGCAGGTGAT CACAGCGGCG
CAGCCCGCCG TGCGGCTCGC TCGTCTCGCC GAACTCGAGG CGCTGGTGGC GCTGCCGGAA
AGCTATGTCG AGCACGCGCG CCAGGCCGCG GCGTCGCTGA CGCTGTGGTC GCTGCCGGAG
CAGGTCTACG TGGTGCGATT GCGTGAACTG GCGCTCGCGG CCGAGCCGGC GACGCGCACC
TATGCCGCGC GCTTCAGCAT CGCTGATCCC GATGAAGCAG TCCGCATCGG CATGAGCGCG
ACGCTGATGC TGCGGGAGCA GGGCGGGCGT CCGGTAGCGC GCCTGCCGCT AACGGCGCTG
TTCAACCACG GTCGCGGGCC GTCGGTCTGG GTCGTCGATG CCGGCGGCAG ACTGGCCGAA
CGCGCCGTGG TGATCGACCG CTACGACGCG CGCTTCGTGC TGATCGTCTC GGGCGTGACC
GAGGGTGAGA GCGTCGTCGC GCTCGGGGTC GAAAAGCTCG ATGCGGGCCT GACGGTGCGG
GCGGTCTCCG CGCTGTCGTT TTGA
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| Protein sequence | MTMREIALFG PAIVALALMV GGCDSALREP AKRDVAAAPL PVIVAPVRYQ DGGRTRTFAA
TIRPAIESDL GFRVNGKVAR RLVRNGDRVR KGQTLLELDP DDLQLQREQA EAEVKAATTS
LSQAAADERR AIELQSKGWA ANTTVEKALA AAQEARSRLI RAQRGLDLAA HSLDYATLAA
EEDGVITATP VEPGQVITAA QPAVRLARLA ELEALVALPE SYVEHARQAA ASLTLWSLPE
QVYVVRLREL ALAAEPATRT YAARFSIADP DEAVRIGMSA TLMLREQGGR PVARLPLTAL
FNHGRGPSVW VVDAGGRLAE RAVVIDRYDA RFVLIVSGVT EGESVVALGV EKLDAGLTVR
AVSALSF
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