Gene RPC_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2790 
Symbol 
ID3970131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3029778 
End bp3030260 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID637925901 
Producthypothetical protein 
Protein accessionYP_532657 
Protein GI90424287 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0740551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.40167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC AGAGAATTCG ATCGGCGTTG CGGGTCGGGG CAGGGCGCCT CGCGGCGCTG 
ATGATGTTGG CGACGTGGCT GGTCGGCGCG GCCTCCGCCG CGGAGATGCA GACGCTGGAG
ATCGTCACCA AATCCGGCGT CCAGGTGTTC GCCGTCGAGG TGGCGACCAC CGAGCAGGAG
AAGACCACCG GGCTGATGTA TCGCAAAGAG CTGGCGGACG GCCGCGGCAT GCTGTTCGAC
TTCTCGCCGG AGCAGCCGGT GTCGATGTGG ATGAAGAATA CCTTCATCCC GCTGGATATG
ATCTTCATCC GCGCCGACGG CCGGATTTCG CGGATCGCCG AGAACACCGT GCCGCAATCG
CTCAGCATCA TCCCGTCGGG ACCGCCGGCC AAGGGCGTGC TCGAGGTGAT CGCCGGCACC
GCCAAGAAAT ACGGCATCGC GCCCGGCGAC CGGGTGGCGC ATCCGTTGTT CAACGGCCGC
TGA
 
Protein sequence
MSEQRIRSAL RVGAGRLAAL MMLATWLVGA ASAAEMQTLE IVTKSGVQVF AVEVATTEQE 
KTTGLMYRKE LADGRGMLFD FSPEQPVSMW MKNTFIPLDM IFIRADGRIS RIAENTVPQS
LSIIPSGPPA KGVLEVIAGT AKKYGIAPGD RVAHPLFNGR