Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2780 |
Symbol | |
ID | 3970120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3017405 |
End bp | 3018310 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925890 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_532647 |
Protein GI | 90424277 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.262601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.241199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT CCGTTCGCAT CGTCGAGGTC GGTCCGCGCG ATGGGCTGCA GAACGAAAAG ACGCCGATCG GCGTCGAAGC CCGCATCGGC TTCATCGAGG CGCTGCTGGG CGCCGGGCTC ACCACCATCG AGGTCGGCGC CTTCGTCTCG CCTAAGGCGA TCCCGCAGAT GCAGGGCTCC GCCGAAGTGC TGCGCGGCGT GCAGCATCTC GCCGGGGAAT TCCACGTGCT GGTGCCGAAC GAAAAGGGCT ATGACGCCGC GCGTGCCGCC GGAGCCAAAG TGATCGCGGT GTTCGCCTCG GCCTCGGAAG GATTCTCTCG CGCCAATATC AATTGCTCGG TGGAAGAGTC GATTGCGCGT TTCAAGCCGG TGATCGCGCG CGCGACAGCA GACGGCATCA AGGTGCGCGG TTATGTGTCT TGCGTGCTCG GCTGCCCCTA TGACGGCGCG GTCGATCCGC AAGCCGTGGT CGATGTCGCG ACCACGCTAT GGGACCTCGG CTGCTATGAG GTCTCGCTCG GCGACACCAT CGGCGTCGGC ACCCCGAAGA AAGTCCGCGA ATTGCTGCGC GCCTGCGCCG AGGCGGTGCC GATGCGAAGT CTGGCGATGC ATTTCCACGA CACCTACGGC CAGGCACTGG CGAATCTCTA TGCCGGGCTG GAGGAGGGCG CGCGGGTGAT CGACGCCGCC GCCGGCGGGC TCGGCGGCTG CCCCTATGCG CCGGGCGCCA CCGGCAACGT CGCCACCGAG GACGTGGTCT ATCTGCTCGA AGGTTTGGGA ATCAGAACCG GCGTCGATCT CGACCGGCTG GTGACGGCGA GCAACGCGGT CGGTGCCCTC ATCGGGCGCG CGCCGCCGAG CCGGGTGGCG GCGGCGATCG GCGCGAAGCA GCGGCGAACA TCGTAG
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Protein sequence | MSDSVRIVEV GPRDGLQNEK TPIGVEARIG FIEALLGAGL TTIEVGAFVS PKAIPQMQGS AEVLRGVQHL AGEFHVLVPN EKGYDAARAA GAKVIAVFAS ASEGFSRANI NCSVEESIAR FKPVIARATA DGIKVRGYVS CVLGCPYDGA VDPQAVVDVA TTLWDLGCYE VSLGDTIGVG TPKKVRELLR ACAEAVPMRS LAMHFHDTYG QALANLYAGL EEGARVIDAA AGGLGGCPYA PGATGNVATE DVVYLLEGLG IRTGVDLDRL VTASNAVGAL IGRAPPSRVA AAIGAKQRRT S
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