| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2772 |
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| Symbol | |
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| ID | 3970150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3009608 |
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| End bp | 3011038 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925882 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_532639 |
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| Protein GI | 90424269 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.323596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG ATCCTTTGAA AACCGTTCAC GTCGTCGGCG GCGGCCTCGC CGGCTCCGAA
GCCGCCTGGC AGATCGCGCA AGCCGGCGTC CGCGTGGTGC TGCATGAGAT GCGCCCGGCG
CGGATGACCG AAGCGCATCG CACCGAGGGG CTGGCCGAAC TGGTCTGCTC CAACTCGTTT
CGCTCCGACG ACGCTGCCAA CAACGCGGTC GGGCTGCTGC ATGCCGAAAT GCGCAAGCTC
GGCTCGCTGG TGATGCGCGC GGCCGATGCC AACCAGGTGC CGGCCGGCGG CGCGCTGGCG
GTCGATCGCG ACGGCTTCTC CGCCGCGGTG ACCAAGGCGC TCGCCGAACA TCCTTTGATC
GAATTGCAGC GCGGCGAGCT CGACGGCCTG CCGCCATCGG ACTGGGGCCA TGTGGTGATC
GCGACCGGTC CCTTGACCTC GGCGCCGCTG GCGTCGGCGA TCCAGGCTTT GACCGGGGAA
GATTCGCTGG CGTTCTTCGA CGCCATCGCG CCGATCGTGC ACCGCGACTC CATCGACATG
TCGGTGGCCT GGTTCCAGTC GCGCTACGAC AAGGTCGGCC CCGGCGGCAA CGGCGCCGAC
TACATCAATT GCCCGATGAC CCGCGAACAG TATGAGGGCT TCGTCGCCGC ATTGATCTCC
GGCGACAAGG TCGACTTCAA GGACTGGGAG ACCAATACGC CTTACTTCGA CGGCTGCCTG
CCGATCGAAG TGATGGCGGA GCGCGGCGCT GAAACGCTGC GGTTCGGCCC GATGAAGCCG
GTCGGCCTGA CCAATCCCAA AGATCCCACC GTGAAGCCCT ACGCCATCGT GCAGCTGCGT
CAGGACAACA AGCTCGGCAC GCTGTACAAT CTGGTCGGCT TCCAGACCAA GCTGAAGCAT
GGCGAGCAGA GCCGCATTTT CCGCAGCATT CCGGGATTGG AAAACGCCGA GTTTGCAAGG
CTTGGCGGGC TGCATCGCAA CACGTTTCTT AACTCGCCGA AGCTATTGGA TCAGCAGCTC
CGGCTGCGCG CCGAGCCGCG GCTGCGCTTC GCAGGGCAAA TGACCGGCTG CGAGGGCTAT
GTGGAATCCG CCTCGATCGG GCTGATCGCC GGGCTGTACG CCGCCGCAGA GGCGCGCGAC
ATCGCATTGG CGCCGCCGCC ATCAACCACG GCGCTCGGCG CCCTGCTCGG CCACATCACC
GGCGGCCACA TCGAGACCAT CGACGCCGGG CCGCGCTCGT TCCAGCCGAT GAACGTCAAT
TTCGGCCTGT TCCCGCCGCT GGAAAGCCCA CCGACCCACG GCGCCGACGG CAAGAAGCTG
CGCGGCCCCG ACAAGACCGT CGCCAAGAAA CAGGCGCTCA GCGCCCGCGC GCTGGCCGAC
CTCGACGGCT GGATTGCGGA GAATTTGCCG GGCGCTGCGG CGGCGGCTTG A
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| Protein sequence | MITDPLKTVH VVGGGLAGSE AAWQIAQAGV RVVLHEMRPA RMTEAHRTEG LAELVCSNSF
RSDDAANNAV GLLHAEMRKL GSLVMRAADA NQVPAGGALA VDRDGFSAAV TKALAEHPLI
ELQRGELDGL PPSDWGHVVI ATGPLTSAPL ASAIQALTGE DSLAFFDAIA PIVHRDSIDM
SVAWFQSRYD KVGPGGNGAD YINCPMTREQ YEGFVAALIS GDKVDFKDWE TNTPYFDGCL
PIEVMAERGA ETLRFGPMKP VGLTNPKDPT VKPYAIVQLR QDNKLGTLYN LVGFQTKLKH
GEQSRIFRSI PGLENAEFAR LGGLHRNTFL NSPKLLDQQL RLRAEPRLRF AGQMTGCEGY
VESASIGLIA GLYAAAEARD IALAPPPSTT ALGALLGHIT GGHIETIDAG PRSFQPMNVN
FGLFPPLESP PTHGADGKKL RGPDKTVAKK QALSARALAD LDGWIAENLP GAAAAA
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