| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2723 |
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| Symbol | |
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| ID | 3970276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2956459 |
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| End bp | 2957382 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637925833 |
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| Product | senescence marker protein-30 (SMP-30) |
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| Protein accession | YP_532590 |
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| Protein GI | 90424220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.513574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.176551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTATT TTTCGCCGCC ACGTCGGTTG GAAACCACCG TGTTCTCGCG GCTTCCAGAC
CGCTTCCGCA AGCCGCGCCG CACCACGTGG GCCGACGCGA ACCAGGGGGG ACGACCGATC
GATTCGTTCC TTGAGGGGCC GTCCTTCGAC CAGCAGGGCC GCCTATACGT CACCGACATT
CCCTATGGTC GCGTTTTCCG GGTCGATGCC GAGGGAAACT GGGAACAGGT CGCCGAATAT
GATGGCTGGC CGAACGGATT GAAGATCCAT CGCGATGGCC GCATCTTCAT CGCTGACTAT
AAGCGCGGGA TCTTGCTGCT CGATCCCGAC AAAGGAAACG TCGAACCCAT CTTGGAGACA
GCGGGGTCAG AGGGATTTAA GGGCGTCAAT GATCTCGTCT TCGCGCCTTC AGGAAATCTC
TATTTCACCG ATCAGGGCCA GACGGGGATG CAGGATCCGA CCGGCCGGGT CTGGTGTCTG
ACGCCGGAAC ACCGGCTCAC TTGCCTCATC GATACGGTGC CCAGCCCAAA CGGAATCGTG
GTTGATGCCC ATGAGTCGGT GCTCTTATTG GCGGTGACCC GGGCAAATCA GATTTGGCGC
ATTCCGTTGC TGGCCAGCGG CATTGTCGCC AAGGTTGGCA TCTTTGCCCA TCTGCACGGT
GGTCCGGGTG GTCCGGACGG CCTCGCGCTC GACGAAGCCG GAAATCTGCT CGTTTGTCAC
ACCGGGTTCG GCTCGGTGTG GCGGCTGTCA CCGGTTGCCG AGCCGCTTGA TCGCATCGTG
TCCTGCGCAG GCGTCGGCAC GACGAATATT GCCTTCGGCG GCCCGGAGAG AAAGTTCGCC
TTCATCACCG AGAGCCGCAC GGGCACCATC TTGCGCGCTG AACTCGATAT ACCCGGCCTT
CAGATGTACT CGCATAGCGC TTGA
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| Protein sequence | MTYFSPPRRL ETTVFSRLPD RFRKPRRTTW ADANQGGRPI DSFLEGPSFD QQGRLYVTDI
PYGRVFRVDA EGNWEQVAEY DGWPNGLKIH RDGRIFIADY KRGILLLDPD KGNVEPILET
AGSEGFKGVN DLVFAPSGNL YFTDQGQTGM QDPTGRVWCL TPEHRLTCLI DTVPSPNGIV
VDAHESVLLL AVTRANQIWR IPLLASGIVA KVGIFAHLHG GPGGPDGLAL DEAGNLLVCH
TGFGSVWRLS PVAEPLDRIV SCAGVGTTNI AFGGPERKFA FITESRTGTI LRAELDIPGL
QMYSHSA
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