| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2719 |
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| Symbol | |
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| ID | 3970311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2951797 |
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| End bp | 2952720 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925830 |
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| Product | senescence marker protein-30 (SMP-30) |
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| Protein accession | YP_532587 |
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| Protein GI | 90424217 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.281224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTTCT TCAGTCCGCC GCGCCGGATC GAAACGAGCG TTTTCACAGC GCTTCCGGAC
CGTTTCCGCA AGCCGCGCCG CACCGCCTGG GCGGATGCCA ACCAGGGCGG CCGCGAGATC
GACGGCTTCC TCGAGGGGCC ATCCTTCGAT CGGCAGGGCC GGCTGTACAT CACGGATATT
CCGTATGGCC GCATCTTTCG CGTCAGTGCG GACGGCGAAT GGGAGCTCGT CTCGGAATAT
GACGGCTGGC CGAACGGGCT GAAGATTCAC CGCGACGGCC GCGTGTTCAT CACCGACTAC
AAGCGCGGGA TCATGCTGCT GGATCCCGCC AGCGGCAGCG TCACGCCGGT CCTGGAGACG
GCGGCAAGCG AGAGTTTCAA GGGCGTGAAC GATCTCGTCT TCGCGCCGTC GGGCAATTTG
TACTTCACCG ATCAGGGCCA GACCGGGATG CACGATCCCA CCGGCCGGGT CTGGAAGCTC
ACGCCCGATG GCCGTCTCAG CTGCCTGATC AACACGATCC CGAGTCCGAA CGGCATCGTC
GTCGATCCAG CGGAGAGTTT TCTGCTGGTG GCGGTGACGC GGGCCAACCA GATCTGGCGC
GTGCCACTGC CGACCAGCGG CCTGACCACC AAGGTCGGCA TATTCTCTCA TCTGCACGGC
GGCCCCGGCG GCCCCGATGG ACTGGCGCTG GACAATGCAG GCAACCTGCT AGTCTGCCAC
ACCGGCTTCG GCTCCATATG GCGGCTGTCA CCGCTGGCAG AGCCGCTCGA TCGCATCGTC
TCCTGTGCGG GCGTCGGCAC GACGAACCTT GCTTTTGGCG GACCGGAGCG AAAGAGCCTC
TTCATCACCG AAAGCCGCAG CGGGACGCTG CTCCGCGCCG AGCTCGAAAC ACCGGGCCTG
CCGATGTTCT CGCACGCCCT CTAG
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| Protein sequence | MTFFSPPRRI ETSVFTALPD RFRKPRRTAW ADANQGGREI DGFLEGPSFD RQGRLYITDI
PYGRIFRVSA DGEWELVSEY DGWPNGLKIH RDGRVFITDY KRGIMLLDPA SGSVTPVLET
AASESFKGVN DLVFAPSGNL YFTDQGQTGM HDPTGRVWKL TPDGRLSCLI NTIPSPNGIV
VDPAESFLLV AVTRANQIWR VPLPTSGLTT KVGIFSHLHG GPGGPDGLAL DNAGNLLVCH
TGFGSIWRLS PLAEPLDRIV SCAGVGTTNL AFGGPERKSL FITESRSGTL LRAELETPGL
PMFSHAL
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