| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2717 |
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| Symbol | |
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| ID | 3970309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2947204 |
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| End bp | 2948568 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925828 |
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| Product | major facilitator transporter |
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| Protein accession | YP_532585 |
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| Protein GI | 90424215 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.773246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.639003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAATG TCGCCACCGC TTCGGCCGAC GCCGGCTTCA CACGCGAGCA GGAAAAGATC
CTATCGAAGG TGATGTGGCG GATCGTGCCC TTTCTTCTGC TCTGCTACAT CATCGCCTAT
CTCGACAGGG TGAACGTCGG CATCGCCAGT CTGACGATGA ACGGCGACCT CGGCATCTCG
CCTTACGAGT TCGGCTGGAG CGCAGGGCTG TTCTTCCTGG GTTATTTCCT CGCCGAGGTG
CCGAGCAATC TGGCCTTGCA GGCCATCGGC GCCCGCAAGT GGATCGCCCG CATCTTGATC
ACCTGGGGGG TGATCTCGGC GGCAACGGCA TTCGTGGTCG GCCCTGTCAG TTTCGGCGTC
ATGCGCTTTC TGCTCGGACT CGGCGAAGCC GGCTTCACCC CCGGCGTGTT TCTCTATTTT
ACGTACTGGT TTCCTGCGCG CGCCCGGGGC ACCGCAACCG CTGCTTTCCT GCTCGGCATC
CCGATCGCGA ACATCATTGG CGCGCCGATC TCGAGTTTGC TGCTCACCAT CGACGGCGTG
GCCGGCCTGC ACGGTTGGCA GTGGCTCCTG ATCCTTGAAG GTCTGCCCGC AACGGTGCTT
GGTGTCGTGT GTTTCTTCAC GCTCACCGAC AAGCCCGAAC AAGCAAAATG GTTGAGCCCC
GAGGAGCGGA CCTGGCTCAA CGGGGTGCTG GCGGCGGAGC GTCAGGCCAT TGCCGCCAAA
CACTCATCGC GGCTCCGGGA CGCCTTCCTC AACTGGCGCG TCCTGACGTG CGCCGCCGTC
AATTTCTGCG CCATCATCGG TTCGGTCGGC CTCGGCCTTT GGATGCCGCA AATCATCAAG
GGCCTCGGCT TTGGTGTCGT TGCCGTCGGC TTCATCGCGG CCGTCCCCTA TATCTGCGGC
GCCATCACGA TGATGCTGTG GGCGCGCCTG TCGGATAAAC GCGGCGAACG CAGCTGGTTC
GTTGCCAGCG GGTTGCTGCT GGGTGCGGTG TCATTGGTTG CTTGCAGCTA CGCGACGTCG
TCGCCGCTAG TCTCGATTGT CGCGCTCAGC GGCGCGGTGA TCGGGATCAT GTGCTACCAG
TCCACCTTCT GGCCGATCCC GTCGAGCTTT CTCACCGGCA GCGCTGCTGC CGGCGGCCTT
GCGATGATCG TATCGATCGG CAATTTGGGC GGCTTCGTCG GCCCTTATCT GATTGGCCTG
ATCAAGCAGT CGACGGACAG CTTTTCATGG GCCCTGTTTT CGGTGGCCGC ATTTCTCACC
TTGGCCGCCA TCCTGATCCG GGTGGTTGGT ATCAGCCTGC AGCGACAGGA TGGGGCAACC
GGCGGCCGCT CCACCCCAAT TGCAAGCCTC CCAAAAGGAG TTTGA
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| Protein sequence | MANVATASAD AGFTREQEKI LSKVMWRIVP FLLLCYIIAY LDRVNVGIAS LTMNGDLGIS
PYEFGWSAGL FFLGYFLAEV PSNLALQAIG ARKWIARILI TWGVISAATA FVVGPVSFGV
MRFLLGLGEA GFTPGVFLYF TYWFPARARG TATAAFLLGI PIANIIGAPI SSLLLTIDGV
AGLHGWQWLL ILEGLPATVL GVVCFFTLTD KPEQAKWLSP EERTWLNGVL AAERQAIAAK
HSSRLRDAFL NWRVLTCAAV NFCAIIGSVG LGLWMPQIIK GLGFGVVAVG FIAAVPYICG
AITMMLWARL SDKRGERSWF VASGLLLGAV SLVACSYATS SPLVSIVALS GAVIGIMCYQ
STFWPIPSSF LTGSAAAGGL AMIVSIGNLG GFVGPYLIGL IKQSTDSFSW ALFSVAAFLT
LAAILIRVVG ISLQRQDGAT GGRSTPIASL PKGV
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