Gene RPC_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2714 
Symbol 
ID3970306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2944444 
End bp2944947 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID637925825 
Productputative 2-pyrone-4,6-dicarbaxylate hydrolase 
Protein accessionYP_532582 
Protein GI90424212 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGC GCAGCAGGCA GCGGGCACAG GCCATCACGC GACGTGGCAT TCTTGCAGGC 
ATGATGGCTT GCAGCACCGG CGCCTGGGCG GCGGCGGTCG AGCAGGCCGT GCGCAACAAC
AGCACGGGCG CGGCGCCGCC GCGCCTGGAT GTGCCGGCAG GGAGCTGCGA CAGCCATCAC
CAAATCTATG ATGAGCGGTT TCCCGCCTCG CCGCATTGGC GCCAGGGCAT TGCAGCGGGT
GCGACCGTCG CCGATTATCG ACTGCTGCAG CGCCGGCTGG GTACGTCCAG AAGCGTGGTG
GTGCAGCCGT CGACCTATGG CATCGACAAC CGCTGTCTCG TGGACGCGCT GGGTCCGCTC
GGACCTGGGT CGCGCGGCGT TACCGTCGTC GACACCGACG TCGGCGACAA GGAATTGCGC
GCGCTGACGG AAGCCGGCGA GCGCGCCATC CGGGTGAATT CGTGTCTCCC CAGACCTGGG
GGACGACGAC ACCGGAGATG CTGA
 
Protein sequence
MRTRSRQRAQ AITRRGILAG MMACSTGAWA AAVEQAVRNN STGAAPPRLD VPAGSCDSHH 
QIYDERFPAS PHWRQGIAAG ATVADYRLLQ RRLGTSRSVV VQPSTYGIDN RCLVDALGPL
GPGSRGVTVV DTDVGDKELR ALTEAGERAI RVNSCLPRPG GRRHRRC