| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2710 |
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| Symbol | |
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| ID | 3970302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2939695 |
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| End bp | 2940714 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925821 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_532578 |
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| Protein GI | 90424208 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGT CGCGGCGGAC ATTGTTGAAG GCTTCGGCAG CCGTGGGCTT GCTGGGCGGC
GCTGCGGCAC CGGGGCTGGC CCGCGCGCAG CAGGCCGAGT TCAGCTACAA ATACGCCAAC
AATCTTCCCG ACACCCACCC GTTGAACCGG CGCGCCCGCG AGATGGCGGC GGCGATCAAG
GCCGAGACCG GCGGTCGGCT CGAGATCCGG ATTTTTCCGA ACAACCAACT CGGTGCGGAC
ACCGACATGC TGAACCAGAT CCGCTCCGGC GGCGTCGAGT TTTTCACGCT GTCGGGCCTG
ATCCTGGCGA CGCTGGTGCC GGCGGCGGCG ATCAACGGTA TCGGCTTTGC TTTCCCGGAC
TACGACACGG TGTGGAAGGC AATGGACGGC GAACTCGGCG GGCATATCCG CGGCGAAATC
ACCAAGGCCA ACCTCGTGGT GATGGACAAG ATCTGGGACA ACGGCTTCCG CCAAACCACC
TCCGCGAACC GGCCGATCAA CGGCCCCGAC GACTTCAAAG GCTTCAAGAT CCGGGTGCCG
GTTTCGCCGC TGTGGACCTC GATGTTCAAG GCGTTCGATG CCGCGCCCGC CGCGATCAAT
TTCAGCGAAG TGTATTCCGC GCTGCAGACC AAGGTGGTCG AAGGCCAGGA AAATCCGCTG
GTGCTGATCG CCACCGCGAA GCTCTACGAA GTGCAGAAAT ACTGCGCGCT GACCAACCAC
ATGTGGGACG GCTTCTGGTT TTTGGCCAAC CGCCGGGCCT GGGAGAAACT GCCGGAAGAT
CTGCGCGCCA TCGTCGCCAA CACCATCAAC GCCGCGGCGG CCAATGAGCG GGCCGACATC
GCCAAGCTGA ACCAGACGCT GCACGACGAC CTCGCCGCCA AAGGGCTGGT GTTCAACCAG
CCGAGCCCTG CTCCGTTTCG CGACAAGCTG CGCAAGGCCG GTTTCTACGC CGAATGGAAA
GCCAAATTCG GCGAGCAGAC TTGGTCGCTG CTGGAGAAAT CCGCCGGCAA ATTGGCGTAG
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| Protein sequence | MSVSRRTLLK ASAAVGLLGG AAAPGLARAQ QAEFSYKYAN NLPDTHPLNR RAREMAAAIK
AETGGRLEIR IFPNNQLGAD TDMLNQIRSG GVEFFTLSGL ILATLVPAAA INGIGFAFPD
YDTVWKAMDG ELGGHIRGEI TKANLVVMDK IWDNGFRQTT SANRPINGPD DFKGFKIRVP
VSPLWTSMFK AFDAAPAAIN FSEVYSALQT KVVEGQENPL VLIATAKLYE VQKYCALTNH
MWDGFWFLAN RRAWEKLPED LRAIVANTIN AAAANERADI AKLNQTLHDD LAAKGLVFNQ
PSPAPFRDKL RKAGFYAEWK AKFGEQTWSL LEKSAGKLA
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