Gene RPC_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2705 
Symbol 
ID3970297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2932479 
End bp2934047 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content66% 
IMG OID637925816 
Productmethionyl-tRNA synthetase 
Protein accessionYP_532573 
Protein GI90424203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCG CATCCGCTTC AGCCCGTCCG GCCTATTTCC TCTCCACGCC GATCTTCTAT 
CCGAACGGCG TGCCGCATAT CGGCCACGCC TATACGGCGA TGGTCAGCGA CGCGATCGCC
CGGTTTCAGC GGCTCGACGG CTATGACGTC CGCTTCCTGA CCGGCACCGA CGAGCACGGC
CTGAAGATGC AGCAGACCGC GATCGCCGAA GGGCTGACGC CGCTGCAGCT CGCCGACCGC
AATTCGGCCC GGTTCCGCGA CATGATGGCG GCGCTGAACA TCTCCTACGA CGACTACATC
CGCACCACGG AGCCGCGCCA CGAGCGCTCC TGCCAGGCGC TGTGGACCGC GATTGAAAAC
AACGGCGATA TCTATCTCGA CAAATATGCC GGCTGGTACT CGGTGCGCCA GGAAGCCTAT
TTCGACGAGG CCGAGACCAC GGTCGGCGAG GACGGCGTGC GCCGCGAGCC GCTCGGCTCG
CCGGTGGAAT GGACCGAGGA GGAGACCTAC TTCTTCCGGC TCTCGGCCTA TCAGGACAAA
TTGCTCGAGC TCTACGCCAA GGTGCCGGAC TTCGTGCTGC CGCGCGAACG GCTCAACGAG
GTGGCGAGTT TCGTCAAGGG CGGGCTGCAG GACCTGTCGA TCTCGCGCAC CACGTTTGAT
TGGGGCATCA AGGTGCCGGG CGCGCCGCGC CATGTGATGT ATGTCTGGAT CGACGCGCTC
ACCAACTACA TCACCGGCGC CGGCTATCCG GACGTCGACA GCGACAGCTT CAAGCGCTAC
TGGCCGGCCA GCCTGCACGT CATCGGCAAG GACATCGTGC GGTTTCATGC GGTGTATTGG
CCGGCGTTCC TGATGTCGGC CGGCGTCGCG GTGCCGCAGC GGGTGTTCAG CCACGGCTTT
CTGCTCAACC GCGGTGAGAA GATGTCGAAG TCGGTCGGCA ACGTGGTCGA CCCTTTCGAG
ATGGCCAAGC AATACGGCGT CGACCAGATG CGCTACTTCT TCATGCGCGA GGTGTCGTTC
GGCCAGGACG GCAGCTACAA TCACGAGGCG ATCGTCAACC GCACCAATGC CGACCTCGCC
AACGACCTCG GCAATCTGGC GCAGCGCTCG CTGACCATGA TCGGCAAGCA GCTCGGCGGC
GTGCTGCCGG AGCCGGGCGA TTTCAGCGAC AATGACAAGG CGATCCTGGC GCAGGCCGAC
GCGATGATTG AGCTCGCCCG CACGGCGATG GCGACCCAGC AGATCCATCA CATGCTGAAT
GCGGTGTGGG CGGTGGTCGC CGAAGCCAAC CGTTACTTCG CCGGCGAAGC GCCGTGGGCG
CTGGCCAAGA CCGATCCTGC GCGGCAGAAG ACCGTGCTCT ACGTCACCGC CGAAGTGCTG
CGGCAGGTCG CGATTTTGGC GCAGCCGGTG ATGCCCGCGT CCGCCGCGAA GCTGCTCGAC
AGCCTCGGCA TTGCCGAGGA GGAGCGCGAC TTCACCCATC TCGGCGGCCA CGAGCGGATC
CGGCCGGGCA CGCCGCTGCC GGCGCCGGCG CCGATCTTTC CGCGCTACGT CGAGCCGACG
CCTTCGTGA
 
Protein sequence
MASASASARP AYFLSTPIFY PNGVPHIGHA YTAMVSDAIA RFQRLDGYDV RFLTGTDEHG 
LKMQQTAIAE GLTPLQLADR NSARFRDMMA ALNISYDDYI RTTEPRHERS CQALWTAIEN
NGDIYLDKYA GWYSVRQEAY FDEAETTVGE DGVRREPLGS PVEWTEEETY FFRLSAYQDK
LLELYAKVPD FVLPRERLNE VASFVKGGLQ DLSISRTTFD WGIKVPGAPR HVMYVWIDAL
TNYITGAGYP DVDSDSFKRY WPASLHVIGK DIVRFHAVYW PAFLMSAGVA VPQRVFSHGF
LLNRGEKMSK SVGNVVDPFE MAKQYGVDQM RYFFMREVSF GQDGSYNHEA IVNRTNADLA
NDLGNLAQRS LTMIGKQLGG VLPEPGDFSD NDKAILAQAD AMIELARTAM ATQQIHHMLN
AVWAVVAEAN RYFAGEAPWA LAKTDPARQK TVLYVTAEVL RQVAILAQPV MPASAAKLLD
SLGIAEEERD FTHLGGHERI RPGTPLPAPA PIFPRYVEPT PS