| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2700 |
|---|
| Symbol | |
|---|
| ID | 3970370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2926939 |
|---|
| End bp | 2928045 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925811 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_532568 |
|---|
| Protein GI | 90424198 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0306531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAACTT CCGCCGAAGA CCGTGTTCAG GCCCGCAATG ATCTGGCGTG GGCGATTGCC
GTCGGCGGCG GCACGACGGT GGTGTTCGCC GGTCTGCTGT TCTTCGCCTG GTATTTTGCC
GCCACGCTGT TCCTGATCTT CGCCGGCATT CTGTTCGGGG TGTTTCTCAA CGCCGTCAGC
GAATTGCTCG GCCGCCTGGT CGGCGGCGGC CACGGGCTGC GGATGACCCT GGTCTGCGTG
CTGCTGACCG GGCTGTTCGC CGGCGTGCTG GTGCTGGGCG GCAGCACCAT CGCCGATCAG
GCCGCGTCGC TCAGCAACAC CATCAAATCG CAAATCGTCA ATGTGAAGAG CTTCCTCGAC
GAGCACGGCG TCGACACCAG CTTCCTCGAC CTCGGCACGC CGGAGCCCCC GGGCACCGCG
GCGCAGCCGC GCAATCTGCC GAGCGCCGGC GCCATCGCCT CGGGCGGTGG CGCGATCGTC
AGTCAGACCT TGAAGCTCAT TCTCGGCACC ATCGGCGCGG TCGGCAACTT CTTCATCGTG
ATCTTCTTAG GCCTGTGTTT CGGCGCGCAG CCGGCGATCT ATCGCAAGGG CCTATTGCGC
AGCGTGCCGG CGCGCTACCG GCTGAAGGCG ACCGAGATCG TCACGGCCAT CGGCGAGATG
CTGAAGCGCT GGCTGCTGGC GCAGATGATC ACCATGGCGG CGGTGTTCGC GGTGACCTCG
ATCGGCCTCA CCATCATCGG CATTCCCGGC GCCTTCATTC TCGGCATCCA GGCCGGATTG
CTGGCCTTCA TCCCGACCAT CGGCGCGCTG CTCGGCGGGC TGATCATCGT GCTGGCGTCG
CTGGCGTCGG GCTGGGTCGC GGTGGCCAGC GCCTTTGCGC TGTTCCTCGC CGTCCATGCC
ATGGAAAGCT ACTTGCTGAC GCCGCTGATC CAGCAGCAGG CGATCGACAT TCCGCCCGGC
ACGCTGTTCG CGACGCAGAT CCTGCTCGGC ATCGTGTTCG GGCTGTGGGG TCTGGCGCTG
GCGCTGCCGC TGATGGCGAT CGCCAAGGTG GTGATGAATC ACCTGAGCGA CGACAGCGCC
GAGCACGGCG CGGCCGTCGT CGGCTGA
|
|---|
| Protein sequence | MTTSAEDRVQ ARNDLAWAIA VGGGTTVVFA GLLFFAWYFA ATLFLIFAGI LFGVFLNAVS
ELLGRLVGGG HGLRMTLVCV LLTGLFAGVL VLGGSTIADQ AASLSNTIKS QIVNVKSFLD
EHGVDTSFLD LGTPEPPGTA AQPRNLPSAG AIASGGGAIV SQTLKLILGT IGAVGNFFIV
IFLGLCFGAQ PAIYRKGLLR SVPARYRLKA TEIVTAIGEM LKRWLLAQMI TMAAVFAVTS
IGLTIIGIPG AFILGIQAGL LAFIPTIGAL LGGLIIVLAS LASGWVAVAS AFALFLAVHA
MESYLLTPLI QQQAIDIPPG TLFATQILLG IVFGLWGLAL ALPLMAIAKV VMNHLSDDSA
EHGAAVVG
|
|---|
| |