| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2698 |
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| Symbol | |
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| ID | 3970368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2925299 |
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| End bp | 2926531 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925809 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_532566 |
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| Protein GI | 90424196 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.110295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG ATATTTCCAC GCTTTATCTC GTCGCGACGC TGCTCGCCGC GTTGCTCGGC
GGAATGCTGA TGTATTTCGG CAAGCAGGAG AATATCGCCG CGCTGGATTG GTGGGGTTAT
GCCTATCTGC TCGGCGCCAC CGACGTCGCG TTGTGGGCGC TGGCCAGTCC GGCGCTGCCG
GAGACTTTTG CGCAGGCGAT CCATGCGCTG GGCTTCATCG CTTGCGGCAT GGTGTGGAAT
GCGGCTCGCG TGTTCCACGG CGCCAAGCCG AATTGGCCCG GCCTGTTGCT CGGCGCGCTG
GCCTGGGTGG CGGCGACCGT CAGCTTGCCG CCTGACGCGG TCGCGCTGCG CATGACGCTC
GGCGCCGGCA TCGTTGCGAT CTATGCCGGG CTGACCGCGG CGCAACTCGG CAGCGAGCGT
CGCAAGGCGG TGCAGCGTCG CTGGCCGGCG ATCCTCGTGC CGCTGCTGCA TGGCGGCGTG
CTGATGGCGC CGATCCTGTT GGCCGACCTG CTGACGCCGG CGGGGCGCCC GATCACCAGC
AACGTCTGGG TGACGATCTT CGCCATCGAG CTGGTGCTGT ATGCGGTCGG CACGGTGTTC
GTGATCTTCA TGCTGGTGTC GGAGCGCACC GTGCGGGCGC ACAAGACCGC GGCCGCGATC
GACCCGTTGA CCGGGATGTT CAATCGCCGC GGCTTTTCCG AGGCCACCAC GCGGATGATC
GCACGCGAGG CCGACGCCGG ACGGCCGGTC ACGGTGATGA TTTTCGACAT CGACTTTTTC
AAGTCGATCA ACGACCGCTT CGGCCATCCC GCCGGCGACG AATTGCTGAA ACTGTTTGCC
ACCCTGGTCA CCAACACGCT GCGCATCAGC GACCTCTCGG GCCGGATCGG CGGCGAAGAG
TTCGCAGCTC TGCTGCCGTG CTCGATGGAC GAAGCGCTGG TCGCCGCCGA GCGGGTCCGC
GAGGCGTTCG AAACCTGCGG CATCGTGGTC GACGACGCGC CGGTCGAAAC CACCGTCAGC
ATCGGCGTCG CCGGCGGACC GCCGCGCACC GAGCTCGAGG TGCTGCTGGC GGCGGCCGAT
ACTGCGCTGT ATCAGGCCAA GCGCGGCGGC CGTAACCGCG TCGAGGCGGC GATGGAACAG
CCGCTGGTGC CGGAGCTGGG GCGGCGCAAG TCGGTCGTCG CCGTCAAATC CCCGGCGCTG
CCGCGTCAGG TCGGGCTGGC CGGCGCCGCG TAA
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| Protein sequence | MSLDISTLYL VATLLAALLG GMLMYFGKQE NIAALDWWGY AYLLGATDVA LWALASPALP
ETFAQAIHAL GFIACGMVWN AARVFHGAKP NWPGLLLGAL AWVAATVSLP PDAVALRMTL
GAGIVAIYAG LTAAQLGSER RKAVQRRWPA ILVPLLHGGV LMAPILLADL LTPAGRPITS
NVWVTIFAIE LVLYAVGTVF VIFMLVSERT VRAHKTAAAI DPLTGMFNRR GFSEATTRMI
AREADAGRPV TVMIFDIDFF KSINDRFGHP AGDELLKLFA TLVTNTLRIS DLSGRIGGEE
FAALLPCSMD EALVAAERVR EAFETCGIVV DDAPVETTVS IGVAGGPPRT ELEVLLAAAD
TALYQAKRGG RNRVEAAMEQ PLVPELGRRK SVVAVKSPAL PRQVGLAGAA
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