| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2696 |
|---|
| Symbol | rplM |
|---|
| ID | 3970366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2924117 |
|---|
| End bp | 2924581 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925807 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_532564 |
|---|
| Protein GI | 162136029 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0952933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGT TTTCGGCTAA GCCGGCCGAG GTCACCAAGA AGTGGATCGT GATCGATGCC
ACGGGCCTGG TGGTTGGCCG GCTCGCGACG CTGGTGGCCA ATCGGCTGCG CGGCAAGCAC
CTTCCGACCT ACACCCCGCA CGTCGATTGC GGCGACCATG TCATTATCGT CAACGCCGCC
AAGGTGGTGC TGACCGGCCG CAAGCGCGAG AACAAGGTGT ATTATCACCA CACCGGGTTC
ATCGGCGGCA TCAAGGAACG CACCGCGAAG TCGATCCTTG AGGGTCGGTT CCCGGAGCGC
GTCGTCGAGA AGGCGATCGA GCGCATGATT CCGCGCGGCC CGCTCGGCCG CATGCAGATG
GGCAATCTGC GGGTCTATGG CGGTCCCGAC CATCCGCACG AAGCCCAGCA ACCCGAACCG
CTCAACGTCG CCGTGATGAA CCGCAAGAAC ATGAGGGCCG CATAA
|
|---|
| Protein sequence | MKTFSAKPAE VTKKWIVIDA TGLVVGRLAT LVANRLRGKH LPTYTPHVDC GDHVIIVNAA
KVVLTGRKRE NKVYYHHTGF IGGIKERTAK SILEGRFPER VVEKAIERMI PRGPLGRMQM
GNLRVYGGPD HPHEAQQPEP LNVAVMNRKN MRAA
|
|---|
| |