Gene RPC_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2660 
SymbolnrdR 
ID3970520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp2889551 
End bp2890036 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID637925771 
Producttranscriptional regulator NrdR 
Protein accessionYP_532529 
Protein GI90424159 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.771858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGTC CGAGTTGCAG TAGCCTCGAT ACCCAGGTTA AGGACTCCCG TCCCACTGAG 
GACTCCGCCG TCATTCGCAG GCGGCGGGTC TGCATGGCCT GCAACTTCCG CTTCACCACC 
TTCGAGCGGG TGCAGCTGCG CGAGCTGACG GTGATCAAGC GCAACGGCCG CCGGGTGCCG 
TTCGACCGCG ACAAGCTGGT GCGCTCGGTG CAGATCAGCC TGCGCAAGCG CCCGGTGGAG 
CCGGAAAAGG TCGAGAAGAT GGTCTCGGCG ATCGTGCGCG AATTGGAAAG CGCCGGCGAG 
GCGGAGATTT CCTCGGAGGC GATCGGCGAG ATCGTGATGG AGCATCTGCG CAAGCTCGAC 
GACGTCGCCT ATGTGCGGTT CGCCTCGGTG TATCGCAATT TTCGCGAGGC GAAGGATTTC 
GAGGCGGTGC TCGGCGAATT GTCCGGCGAC GAGATGGCGC GGCTGGCCGC GTTGCGGCTG 
AAATGA
 
Protein sequence
MRCPSCSSLD TQVKDSRPTE DSAVIRRRRV CMACNFRFTT FERVQLRELT VIKRNGRRVP 
FDRDKLVRSV QISLRKRPVE PEKVEKMVSA IVRELESAGE AEISSEAIGE IVMEHLRKLD 
DVAYVRFASV YRNFREAKDF EAVLGELSGD EMARLAALRL K