Gene RPC_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2653 
Symbol 
ID3970513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2884487 
End bp2885002 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID637925764 
ProductMarR family transcriptional regulator 
Protein accessionYP_532522 
Protein GI90424152 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.307722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.511326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG CCGTTGCCAC GGCGGTGGAA ACCGCTTCGA CCGCGTCCGG CGTCACGCCG 
GTGCAGCCAC TCTATCTCGA AGCGCTGACC TTGGTGGAAC GGCTGCATCG CCGGCTGCTC
GACGTGATCA AGGACGAGTT CGACCGCCGC GGACGCTCTG ATATCAACTC GGTGCAGGCG
CTGTTGCTGT ACAACATCGG CGACAAGGAA TTGACCGCCG GCGAGCTGCG CACCCGCGGC
TACTACCTCG GCTCCAACGT CTCCTACAAT TTGAAGAAGC TGGTCGAACT CGGCTTCCTC
GATCATCAGC GTTCGCGGGT GGATCGCCGC TCGGTGCGCA TCCGGCTCAC CACGCAGGGC
CAGGAGATCC GCCACATCGT CGATGCGCTG TATCAGAAGC ACGTCAAGAC CGTCGAGCAG
GTCGGCGGCA TCTCCAACGA CGAGTTCGCC ACGCTGAACA AGTCGCTGCA TCGGCTGGAG
CGGTTCTGGA CCGACCAGAT CCTGTATCGG CTTTGA
 
Protein sequence
MIKAVATAVE TASTASGVTP VQPLYLEALT LVERLHRRLL DVIKDEFDRR GRSDINSVQA 
LLLYNIGDKE LTAGELRTRG YYLGSNVSYN LKKLVELGFL DHQRSRVDRR SVRIRLTTQG
QEIRHIVDAL YQKHVKTVEQ VGGISNDEFA TLNKSLHRLE RFWTDQILYR L