Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2647 |
Symbol | |
ID | 3970507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2877748 |
End bp | 2878905 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637925758 |
Product | major facilitator transporter |
Protein accession | YP_532516 |
Protein GI | 90424146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.652327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGGA CCAATCAGCT TGCGGCGGCA GCCGCTGCCT TGATGCTGGT GGTCGCGATG GGGTTCGGCC GCTTCGCGTT CACCGGCCTC TATCCGCTGA TGGTGGCGGA CGGTCAGATC TCGCTCGACG GCGGCGCCTA TGCCGCCTCG GCCAATTATG CCGGCTATCT GATCGGTGCG TTGCTGGCCG CGGTGTGGAC GGCGATCTCC AGTCGAAAAC TCTGCGCCTT AGCGACCGCA ACAACCCTTG TGATGCTCGG CCTGCTCGCC GTGGCAATGC CCGAATGGCT GATCATCGCG GTGCGCGGCG TAGCCGGTGC GGCGAGCGCG GTTGCGATGG TGGCTGCCTC GCATTGGCTG ATCCACGATC GCGGCCATCA TCATGGCGCG CCGACGTTGT TCGCCGGCGT CGGACTTGGA ATCTTGGTGT CGGCGGAAAT CATCGCGGCG GGCCATGGTG CGGCGCTGTC GAGCCGCGCC ATCTGGTTGA CGGTTGCGAT GGCGGCGTCG GTTATCGGCG TGATCGCGGT CGCGATGCAG TGCCGCATCG ATCGCATCAA GCCGCAGGTC GAACCTGCTG TGCGGCGGCT GCGCGAGGAG CGGCCGCCGC CCTTTGGGCC GACCCGGCTG GTCGTGATCT ATGGTCTCGC CGGTTTTGGC TACATCATCA CCGCGACCTA TCTGCCCCTG TTCGTTCGCA GCGCAATGGC ATCGGTCGAT CCCGTGCATG TCTGGGCGAT CTTTGGCCTC GGCGGCGCGC CGTCCTGCTT CATCTGGCAC GCGCTCCACC AGCGCTGGGG TACCCGCCAT AGCCTGATGG TCAATCTGGC ACTGCAGGCG ATCGGTGTGG CGCTGCCGGT ACTGCACAGC TCGGCAGCCT ATGTCGGTTC GGCGCTGTTG GTCGGTGGGA CATTCATGGG GACCGTCACC ATCGTGATGC CGGCGGCGCG GCGTATGGCT GCGACAACCC GCTTCAATAT GCTTGCCATC CTGACCGCCG CCTATGGCGT CGGACAGATC ATCGGCCCGC TGATCGCCTC CGCACTGTTT AGCCGGACGC AATCCTTCGA CGCATCGCTT GTCGCAGCCG CCGTCGCACT CATCATTGCC GCCGGCTTCT GTTTTGGGAC CGCGCGGCCG GTCCGGCCGG TGCGCTAG
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Protein sequence | MRRTNQLAAA AAALMLVVAM GFGRFAFTGL YPLMVADGQI SLDGGAYAAS ANYAGYLIGA LLAAVWTAIS SRKLCALATA TTLVMLGLLA VAMPEWLIIA VRGVAGAASA VAMVAASHWL IHDRGHHHGA PTLFAGVGLG ILVSAEIIAA GHGAALSSRA IWLTVAMAAS VIGVIAVAMQ CRIDRIKPQV EPAVRRLREE RPPPFGPTRL VVIYGLAGFG YIITATYLPL FVRSAMASVD PVHVWAIFGL GGAPSCFIWH ALHQRWGTRH SLMVNLALQA IGVALPVLHS SAAYVGSALL VGGTFMGTVT IVMPAARRMA ATTRFNMLAI LTAAYGVGQI IGPLIASALF SRTQSFDASL VAAAVALIIA AGFCFGTARP VRPVR
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