| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2641 |
|---|
| Symbol | era |
|---|
| ID | 3973050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2871894 |
|---|
| End bp | 2872856 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637925752 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_532510 |
|---|
| Protein GI | 90424140 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.212948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.949249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATG ATGTTTTGAA CGATCACGTT GAGTCCGAGC AAGACGCCGA ATCCGCTGCC
GGGCCGGTTG AAACCCGCTG CGGTTTCGTC GCGCTGATCG GCGCGCCGAA TGTCGGCAAA
TCGACGCTGG TCAACGCGCT GGTCGGCTCC AAGGTCACCA TCGTGTCGCG CAAGGTACAG
ACCACGCGCG CCCTGATCCG CGGCATCGTG ATCGAGGACC ACGCCCAGAT CATCCTGGTC
GACACCCCCG GCATCTTCCT GCCGAAGCGC AGGCTCGACC GCGCCATGGT CAAGACCGCG
TGGAGCGGGG CGCACGACGC CGATCTGGTC TGCGTGCTGC TCGACGCCCG CGAAGGCATC
GACGAGGAGG CCGACGCGAT CCTGACCAAA CTGTCGCAGG TCAATCATCC GAAGATCCTG
GTGATCAACA AGGTCGACAT CGTCTCCAAG GAAAAGCTGT TGAAGCTGGC GCAATCCGCC
AACGAGCGGC TGAAATTCGA CGAGACCTTC ATGGTGTCGG CGCTGTCCGG CGACGGCGTC
GAGGACCTGC GCAAGTCGCT GGCCTCCAAG GTGCCGCCGG GCCCCTATCA CTATCCGGAA
GACCAGATGT CGGACGCGCC GATGCGGCAT CTGGCGGCGG AAATCACCCG GGAAAAAATC
TTCCGCCAGC TGCACCAGGA ATTGCCCTAT CAGTCCACGG TGGAGACCGA CACCTGGACC
GAGCGCAAGG ACAAGTCGGT GCGGATCGAG CAAACGATCT TCGTCGAGCG CGAAAGCCAG
CGCAAGATCG TGCTCGGCAA GGGCGGCGCC ACCATCAAGT CGATCGGCGC GGATTCCCGC
AAGGAGATCG CCGAGATTTT GGGCCAGCCG GTCCACCTGT TCCTGTTCGT CAAAGTGCGC
GAGAACTGGG GCGACGATCC CAATCGCTAT CACGAGATGG GCCTCGAGTT CCCGAAGGAT
TAA
|
|---|
| Protein sequence | MKDDVLNDHV ESEQDAESAA GPVETRCGFV ALIGAPNVGK STLVNALVGS KVTIVSRKVQ
TTRALIRGIV IEDHAQIILV DTPGIFLPKR RLDRAMVKTA WSGAHDADLV CVLLDAREGI
DEEADAILTK LSQVNHPKIL VINKVDIVSK EKLLKLAQSA NERLKFDETF MVSALSGDGV
EDLRKSLASK VPPGPYHYPE DQMSDAPMRH LAAEITREKI FRQLHQELPY QSTVETDTWT
ERKDKSVRIE QTIFVERESQ RKIVLGKGGA TIKSIGADSR KEIAEILGQP VHLFLFVKVR
ENWGDDPNRY HEMGLEFPKD
|
|---|
| |