| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2632 |
|---|
| Symbol | |
|---|
| ID | 3973041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2863542 |
|---|
| End bp | 2864222 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637925743 |
|---|
| Product | uracil-DNA glycosylase superfamily protein |
|---|
| Protein accession | YP_532501 |
|---|
| Protein GI | 90424131 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.122532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.188311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCA TCGCGCGAAG CGAACCCGAC CGGAACTGCC CGCTGTGCCC GCGGCTGGTC
GACTATCGAC TGGCGGTGCG GGCCCGCGCG CCGGACTGGT TCAATGCCCC GGTGCCGACC
TTCGGCGATC CCGACGCGGC ATTGCTGATC GTCGGGCTCG CCCCCGGCGT GCAGGGCGCC
AACCGCACCG GCCGGCCGTT CACCGGCGAC TTTGCCGGCG ACCTGCTCTA CGCCACGCTG
ATCGAGCATG GCTTTGCGAA AGGTGTCTAT CAGGCGCGAC CCGATGACGG CTTGCGGCTG
GTCGACTGCC GGATCGCCAA CGCGGTGCGC TGCGTGCCGC CGCAGAACAA GCCGCGGCCG
GTCGAAATCA ACACCTGCCG GCAGTTTCTC TCGGCGGTGT TAGAGACCAT GCCGCGGCTC
ACCGCCATCG TGGCGCTCGG CCGGGTGGCG CACGACTCGA CGGTCAAAGC GCTCGGCCTG
CGCGCCTCCG CCGCGCCGTT CGGCCACGGC GCGGTGCATA CGGCCGGCGC CCGCACGCTG
TACGACAGCT ATCATTGCTC GCGCTACAAC ACCAACACCC GGGTGCTGAC GCCACAGATG
TTCCGCGAGG TGTTTGCAAA AGTGCGCGCT GATCTCGATG GCGACAAACC AAAGCGCGCC
ATGAGCAAAA CGTCATCCTG A
|
|---|
| Protein sequence | MMAIARSEPD RNCPLCPRLV DYRLAVRARA PDWFNAPVPT FGDPDAALLI VGLAPGVQGA
NRTGRPFTGD FAGDLLYATL IEHGFAKGVY QARPDDGLRL VDCRIANAVR CVPPQNKPRP
VEINTCRQFL SAVLETMPRL TAIVALGRVA HDSTVKALGL RASAAPFGHG AVHTAGARTL
YDSYHCSRYN TNTRVLTPQM FREVFAKVRA DLDGDKPKRA MSKTSS
|
|---|
| |