| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2625 |
|---|
| Symbol | |
|---|
| ID | 3973034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2858814 |
|---|
| End bp | 2859518 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637925736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_532494 |
|---|
| Protein GI | 90424124 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.572906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.294504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGA CCGCCGAAGC CAAAGCCGTT CTTGCTCGCG TCTCCACCGC GACCATCACC
ACCGTGCTGT TGAAGAAGGG ACTGCGCAAC GTCTGGATGC GCGGCGCGCG TCCGCTGCGT
CCCGGGCAGG CGCGTTTGGT GGGTGAAGCG TTCACGCTGC GCTTCGTGCC GGCGCGCGAG
GATCTGGCGA CGCCGGCGTC GTGGTCGTCG CCGATCTCCA CCCGCACCGC GATCGAAGCG
ATGCCGGAGG GCTGCATCGC CGTGGTTGAC GCGATGGGCG TCAGCGACGC CGGCATCTTT
GGCGACATCC TGTGCGCGCG GATGGCCAAG CGTAACGTCG CCGCATTGAT CACCGACGGC
GTGGTGCGCG ATCTCGAAGG CGTGCTCGGC ACCGGGCTGC CGGTGTGGTG CAATGGCGCA
GCGGCGCCGC CCTCGGTCGC GGGCCTGACC TTCGTCGGCT GGGGCGAGCC GATCGGCTGC
GGCGGCGTCG CGGTGTTTCC GGGCGATATC GTGGTTGCCG ATCAGGACGG CGCGGTGCTG
ATCCCGCAGG CGATGCTCGA GCACGTGCTC GCCGAAGGCG AAGAGCAGGA ACGGATGGAA
GGCTGGATCG TCAACGAGGT CAACGCCGGC GCGCTGCTGC CGGGCCTGTA TCCGATGAAC
GACGCCACCA AGGCGCGCTA CGCCGCCTGG AAGGCCAAGG GTTAA
|
|---|
| Protein sequence | MSLTAEAKAV LARVSTATIT TVLLKKGLRN VWMRGARPLR PGQARLVGEA FTLRFVPARE
DLATPASWSS PISTRTAIEA MPEGCIAVVD AMGVSDAGIF GDILCARMAK RNVAALITDG
VVRDLEGVLG TGLPVWCNGA AAPPSVAGLT FVGWGEPIGC GGVAVFPGDI VVADQDGAVL
IPQAMLEHVL AEGEEQERME GWIVNEVNAG ALLPGLYPMN DATKARYAAW KAKG
|
|---|
| |