| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2620 |
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| Symbol | rimO |
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| ID | 3973299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2854311 |
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| End bp | 2855636 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925731 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_532489 |
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| Protein GI | 90424119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.364941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.313039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCAGG CGGCTGCGCC CAAAGTCAGC TTCGTTTCGC TCGGGTGCCC GAAGGCGCTG
GTGGATTCCG AACGCATCAT CACCAGGCTG CGCGCCGAGG GCTACGAACT CGCGCGCAAG
CACGACGGCG CCGATCTGGT GATCGTCAAC ACCTGCGGTT TTCTCGACAG CGCCAAGAAG
GAATCGCTCG GCGCCATCGG CGAAGCCATG GCCGCCAACG GCAAGGTGAT CGTCACCGGC
TGCATGGGCG CGGAACCCGA GCAGATCGAA GCCGCCTACC CCAACCTGTT GTCGATCACC
GGCCCGCAGC AATATGAGAG CGTGCTCGAC GCGGTGCATC GCGCGCTGCC GCCGTTGCAC
AATCCGCATC TCGATCTGGT GCCGGCGCAG GGCATCAAGC TGACGCCGCG GCACTACGCT
TACTTGAAGA TTTCCGAGGG CTGCAACAAC CGCTGCAGCT TCTGCATCAT TCCGAAGCTG
CGCGGCGATC TGGTATCACG GCCGGCCGGC GAGGTGTTGC GCGAGGCCGA GAAACTGGTG
AAGGCCGGGG TCAAGGAATT GCTGGTGGTG TCGCAAGATA CCTCGGCCTA CGGCGTCGAC
CTGAAATACG CCGAGAGCCC GTGGCAGGAT CGCAACGTGC GCGCCCGGTT CTACGATCTC
GCGAAAGAGC TCGGCGAACT CGGCGCCTGG GTGCGGCTAC AATATGTCTA CCCCTACCCG
CATGTCGACG AGGTGATCGG GCTGATGGCG CAGGGCAAGG TGCTGCCCTA TCTCGACATC
CCGTTCCAGC ACGCCAGTCC CGAAGTCTTG AAGCAGATGA AGCGCCCGGC GGCGCAGGAC
AAGACGCTGG CGCGTATCAA GCAGTGGCGC GAGATCTGCC CAGAACTGAC GCTGCGCTCG
ACCTTCATCG TCGGCTTTCC CGGCGAGACC GACAGCGACT TCGCCTATCT CCTCGATTGG
CTGGAGCAGG CCGAGATCGA CCGCGTCGGC GCATTCAAAT ACGAGGCGGT GCGCGGCGCC
ACCTCGAACG CGCTACCGGA TCAGGTCAGC GACGAGGTCA AGACCGAGCG CTGGAACGCG
TTGATGGCGC GGCAGCAGAA GATCTCGGCG CGGCGGCTGA AGCGCAAGGT CGGCACACGG
CAGCAGGTGA TCATCGATGA GGTGGGGCCG ACCGTCTCGA AGGGCCGCTC CAAAGCCGAC
GCGCCGCAGA TCGACGGCAG CGTGTATCTG ACGAGCCGCC GGCCGCTGCG GGTCGGCGAA
ATCGTTACCG CCAAGATCGA ACGCGCCGAC GCCTACGATC TGCACGGCAG CGTCGCGGGG
TTTTAG
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| Protein sequence | MNQAAAPKVS FVSLGCPKAL VDSERIITRL RAEGYELARK HDGADLVIVN TCGFLDSAKK
ESLGAIGEAM AANGKVIVTG CMGAEPEQIE AAYPNLLSIT GPQQYESVLD AVHRALPPLH
NPHLDLVPAQ GIKLTPRHYA YLKISEGCNN RCSFCIIPKL RGDLVSRPAG EVLREAEKLV
KAGVKELLVV SQDTSAYGVD LKYAESPWQD RNVRARFYDL AKELGELGAW VRLQYVYPYP
HVDEVIGLMA QGKVLPYLDI PFQHASPEVL KQMKRPAAQD KTLARIKQWR EICPELTLRS
TFIVGFPGET DSDFAYLLDW LEQAEIDRVG AFKYEAVRGA TSNALPDQVS DEVKTERWNA
LMARQQKISA RRLKRKVGTR QQVIIDEVGP TVSKGRSKAD APQIDGSVYL TSRRPLRVGE
IVTAKIERAD AYDLHGSVAG F
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