Gene RPC_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2614 
Symbol 
ID3973293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2848617 
End bp2849378 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID637925725 
Productinvasion associated locus B 
Protein accessionYP_532483 
Protein GI90424113 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0807457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.637566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC GTCTCTTGGC CGCGTCGGCC TTGCCGCGCG GGCGGGCTAT CGCTCTGCTG 
GCGGCAACAA TGACCGCCAT GACCGTGATT CCTGCGGCGC AGGCGCAGCA GCCGCCCGCC
GCTCCGAAGG CGGCTCAGAA AGCCGCGCCA GCACCGAAGG CGGCGCCCAA GGCAGCGCCC
GGAGCCCAGG CGCCGGCCGT TCCGCCGGCC GACCAGCAGG TGCAGCTGAT CTACGCACCG
TGGACTAAGT TCTGCCTGAA GGGGCAGGAT GCCAACGCCA AGCAGGTCTG CTTCACCGGC
AAAGACGGCC GAATCGAATC CGGCCAGCCG GTGATCGCCG CGGTGATCAT CGAGCCGGAA
GGCGAGCCGA AAAAGATCCT GCGGGTCACG CTGCCGCTCG GCATGCAGCT GGTGCATGGA
ACGCGGGTCA TCGTCGATAA CAACCCGCCG GCGCAGAGCC CTTATGTGAT CTGCTTCGCC
AACGGCTGCA TGTCGGACTA CGAAGTCACG CCGGAACTGC TCGCCAACCT CAAGAAGGGC
CAGAACCTGA TCGTCCAGGC GATCAATTCG AACGGCGCGC CGCTGACGTT GCCGTTGCCG
CTGGCGGAAT TCGCCAAAGC CTATGACGGC CCGCCGACCG ACCCGAAGCA GTTCGAAGAG
ACCCAGAAGA AGCTGCAGGA AGAGCTGCAG AAGCGCGCCG AAGAGCAGCG CAAGAAGCTC
GAGGCGCAGC AGCCCGCTGC GGCCAACCCG GCGGCGAAGT AA
 
Protein sequence
MNFRLLAASA LPRGRAIALL AATMTAMTVI PAAQAQQPPA APKAAQKAAP APKAAPKAAP 
GAQAPAVPPA DQQVQLIYAP WTKFCLKGQD ANAKQVCFTG KDGRIESGQP VIAAVIIEPE
GEPKKILRVT LPLGMQLVHG TRVIVDNNPP AQSPYVICFA NGCMSDYEVT PELLANLKKG
QNLIVQAINS NGAPLTLPLP LAEFAKAYDG PPTDPKQFEE TQKKLQEELQ KRAEEQRKKL
EAQQPAAANP AAK