| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2600 |
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| Symbol | |
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| ID | 3970709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2825746 |
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| End bp | 2828505 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925711 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_532469 |
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| Protein GI | 90424099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0728813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.398364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG TCGTCGCCGT TCTGCTCTTG GTCACCGCTG CTCATGCTGC CATCTGGGGG
ATCTTCAGGG AACAGCAGCA GGCACCGGAT TTCCGAGGCA TCCTTCCCAG CGTTTCCTAC
GCACCGTTTG ACGGCACCGG GCATCCGGAC GTCGACAACA TTCCCAATGC CGAGCGCATC
CGCTCCGACC TGAAGACGCT GGCGCCACTC AGCCGCGCCA TCCGGTTGTA CTCCTCGACC
GGCGGCGTCG AACTGGTGCC GCCGATCGCC GGCGAGGTCG GCCTCAAGGT CACCGTGGGC
GCCTGGATCG ACAAGAACGT CGATCGCAAC GAGCGCGAGA TGCTGTCGGC GATCGACCTC
GTCAAGCACA ACAGCAACGT CAACGGCATC GTGGTCGGCA ACGAAACCAT CTACCGCGGC
GAGCAGAAGG TCGAAGACCT CATCAAGCTG ATCCAGCGCG TCAAGGGCCA AGTCAACGTC
CCGGTGACCA CCGGCGAGAT CTGGAACATC TGGCTCGAGC ATCCGGAACT CGCCTCCTCG
GTCGACTTCA TCGCCGCGCA CATCCTGCCC TATTGGGAAG GTTTTTCCGA CACCAAGGCG
GTCGACCAGG CGCTGATCAT CTATCAGAAG CTGCGCGACG CGTTTCCCGG CAAGCGCATC
GTGATCGCCG AATTCGGCTG GCCCTCCGCC GGCTACAATC TGAAGGACGC GGTGCCCGGC
CCGTTCGAGC AGGCGGTGAC GCTGCGCAAT TTCGTCAACC GCGCCGAAGC CATCGGCATG
GAATACAACA TCGTCGAGGC GATCGATCAG CCCTGGAAAT TCTTCGAAGG CGGCGTCGGT
CCGTATTGGG GGATCCTGAA CGCGGCGCGC GAACCGAAAT TCGCCTGGAG CGGCCCGGTG
GTCGATCCGG CCTATTGGAA GCTCGCCGGC ATCGCGCTGC TGATCGGCAT CCTGCTGTCG
ACGCCGATCC TGCGGCTGGC CCAGCCCAGC GCGATGCAGT CGTTCATGCT GTCGGCGGCC
GCGCACGGCG TCGGCGCCTG GGTCGCCACC GTATTCGCCT ACTGGAACGG GCATTATTTC
GTGTTCGGCT CGGCGCTGGC GCTAACGCTG GGCTTGATCC TGCTGGTGCC GCTGGTGTGT
ATCGCGATGG CGCGGATCGA GGAAATCGCC GCGGTTGCGT TCGGCCGCGC GCCGGTCCGG
CTGTTGAAGA AGCCGCCGCC GGCGACCGTG GCGTCGCCGC CGCTGGCGCT GGCCGCGTCC
TCCGCAGAGG CGGTCCGCGC CGATGCAGAC CAAGTCGGCG ACGTCGTCGC CGAAGCCCCC
AAGATGCCGA AGGTGTCGAT CCATATCCCG GCCTATTTCG AGCCGCCGGA TATGTTGAAG
CAGACGCTGG ATGCGGTGGC GCGGCTGGAT TATCCGAACT TCGAATGCGT GGTGATCATC
AACAACACCC CGGATCCGGA ATTCACTCAG CCGATCCAGG ATCACTGTCG CGAGCTCGGC
GAGCGCTTCA AATTCATCAA CGCCGAGAAG GTCGAGGGCT TCAAGGCCGG CGCGCTGCGC
ATCGCCATGG AGCGCACCGC CGCCGACGCC GAGATCATCG GCATCATCGA CGCCGACTAT
ATGGTCGAGC CGGACTGGCT GAAGGATCTG GTGCCGGCGT TCGATGACCC GCGGGTCGGG
TTGGTGCAGG CACCGCAGGA CCATCGCGAC GGCGACCGTT CGCTGATGCA CTACATCATG
AACGGCGAAT ATGCCGGGTT CTTCGACATC GGCATGGTGC AGCGCAACGA GCTCAATGCC
ATCATCGTGC ACGGCACGAT GTGCCTGATC CGCCGCGCCG CGATGGAGAT GGTCGGCGGC
TGGGCCGGCG ACACCATCTG CGAGGATAGC GACCTCGGCC TGGAAATCAT CGAGCATGGC
TGGCTGACCC ATTACACCAA CCATCGCTAC GGCTATGGCC TGTTGCCGGA CACCTATGAG
GCCTTCAAGA AGCAGCGGCA TCGCTGGGCC TATGGCGGCT TCCAGATCAT CAAGAAGCAT
TGGCGGCGCT TCCTGCCGGG CGCCAGCCGG CTGACGCCGG ATCAACGGCG GGAATTCGCG
CTGGGCTGGC TGAACTGGCT CGGCGCCGAG AGCCTCGGCG TGGTGGTGGC GATCCTCAAT
CTGATCTGGG TTCCGATCGT CGCCTTCGCC GACATCGCGA TCCCCGACAA GATCCTGACG
CTGCCGATCA TCGCCTCGTT CGTGGTGACG CTGGCGCACT TCCTGGTGCT GTACCGGCTG
CGGGTGAAGA TCACCGTGCC GCGGATGCTG GGCGCGATGA TCGCGGCGAT GTCGGTGCAG
TGGACGGTGT CGCGCGCGGT GGCGCAGGGC CTGATCACCG AGCACCTCGC CTTCGCCCGC
ACCTCCAAGG GCGGCTTTTC GCTGATGTCG GTCGAGTTCC AGGCGTTCTG GGAGGCGGTG
ATCGGCGTGC TGCTGCTGGT CGGCGCCGCC GTGCTGGTGG CCTCCAACGC CTATAAGGAA
GTCCACGAGA TCTACATCTT CGCCGCGGTC TTGGTGCTGC AGAGCCTGCC GTTCCTGGCC
GCGGTGGCGA TCGCGATCCT GGAGAACTCG CGGATCAATT CGTTTGCGTT CTGGAAGAAC
ACCGGGGTGC GCACCGCCGA ATTGATCGGG CTGCGGCCGG TGGCGTTGCC CAAGACCGTG
CCGGCGGCGA TGCCGGCGCC GCAGCCGGTG GTGTCGGAAA TCCACCGCGA TACCGTGTAA
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| Protein sequence | MRAVVAVLLL VTAAHAAIWG IFREQQQAPD FRGILPSVSY APFDGTGHPD VDNIPNAERI
RSDLKTLAPL SRAIRLYSST GGVELVPPIA GEVGLKVTVG AWIDKNVDRN EREMLSAIDL
VKHNSNVNGI VVGNETIYRG EQKVEDLIKL IQRVKGQVNV PVTTGEIWNI WLEHPELASS
VDFIAAHILP YWEGFSDTKA VDQALIIYQK LRDAFPGKRI VIAEFGWPSA GYNLKDAVPG
PFEQAVTLRN FVNRAEAIGM EYNIVEAIDQ PWKFFEGGVG PYWGILNAAR EPKFAWSGPV
VDPAYWKLAG IALLIGILLS TPILRLAQPS AMQSFMLSAA AHGVGAWVAT VFAYWNGHYF
VFGSALALTL GLILLVPLVC IAMARIEEIA AVAFGRAPVR LLKKPPPATV ASPPLALAAS
SAEAVRADAD QVGDVVAEAP KMPKVSIHIP AYFEPPDMLK QTLDAVARLD YPNFECVVII
NNTPDPEFTQ PIQDHCRELG ERFKFINAEK VEGFKAGALR IAMERTAADA EIIGIIDADY
MVEPDWLKDL VPAFDDPRVG LVQAPQDHRD GDRSLMHYIM NGEYAGFFDI GMVQRNELNA
IIVHGTMCLI RRAAMEMVGG WAGDTICEDS DLGLEIIEHG WLTHYTNHRY GYGLLPDTYE
AFKKQRHRWA YGGFQIIKKH WRRFLPGASR LTPDQRREFA LGWLNWLGAE SLGVVVAILN
LIWVPIVAFA DIAIPDKILT LPIIASFVVT LAHFLVLYRL RVKITVPRML GAMIAAMSVQ
WTVSRAVAQG LITEHLAFAR TSKGGFSLMS VEFQAFWEAV IGVLLLVGAA VLVASNAYKE
VHEIYIFAAV LVLQSLPFLA AVAIAILENS RINSFAFWKN TGVRTAELIG LRPVALPKTV
PAAMPAPQPV VSEIHRDTV
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