Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2592 |
Symbol | tgt |
ID | 3970700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2819056 |
End bp | 2820189 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925702 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_532461 |
Protein GI | 90424091 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00946662 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.321303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG CCAATCACTT CGAACTCATC GGCCAAAGCG ACGCGGCACG GCTCGGCCGG CTGACCACGC CGCATGGCGT GGTGCGTACG CCGGCCTTCA TGCCGGTCGG CACGCTCGGC GCCATGAAGG GGCTGCATTG GCGCGAGGTG CGTGACGCCG GCGCCGACAT CGTGCTCGGC AACACCTATC ATTTGATGCT GCGGCCCGGC GCCGAGCGGA TCGCAGCGCT CGGCGGCCTG CAGAAATTCA CCACCTGGAA CGGGCCGATG CTGACCGATT CCGGCGGCTT CCAGGTGATG TCGCTGGCGC AGCTGCGCAA GGTCACCGAG AAGGCGGTGA ATTTTCGCTC GCATATCGAT GGCGCGGCGA TCGAGCTATC GCCGGAGCGT GCCATCGAAG TGCAGCTGTT GCTCGGCTCC GACATCGCGA TGCAGCTCGA CGAATGCGTG CGGCTGCCGG CGGAGCGCGA CGACATCGAC CGCGCGATGC GGTTGTCGCT GCGCTGGGCG GAACGCTGCA AGCGCGCCTT CGAGCACGCG CCGCAGGGTC ACATGCTGTT CGGTATCGTG CAGGGCGGCG ACGTGCCGGA GCTACGCCAG CAAAGCGCGC GCGGGCTGAT CGAGATCGGG TTCCACGGCT ATGCGATCGG CGGGCTGGCG GTCGGCGAGC CGCAACAAGT GATGCTGGCG ATGATCGAGG AGACCGCGCC GGTGCTGCCG CAGGACCGGC CGCGCTATCT GATGGGCGTC GGCACGCCGG AGGATATTCT GGAGGCGGTG GCGCGCGGCA TCGACATGTT CGATTGCGTG ATGCCGACAA GGAACGGACG CCACGGTGTG GCGTTTACCC GCTTTGGTTC GGTGAACCTG CGCAACGCGC GCCATGCCGA CGACCCGCGT CCGCTCGACG CGGAGAGTAA TTGGCCGTCG ACGCGCAATT GCTCGCGGGC TTATCTGCAT CATCTGGTGA AGTCGGGCGA GACGCTCGGC GCCATGCTGT TGTCGGAGAT CAACATCGCT TACTACCAGA GCCTGATGAG CGGCATCCGC GAGGCGATCG GCAACGGCAC GTTCGAGGCG TTTCGGCAGC AGACCCGCGA AGACTGGGCG CGCGGCGATA TCCCGGCGCT GTAG
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Protein sequence | MTLANHFELI GQSDAARLGR LTTPHGVVRT PAFMPVGTLG AMKGLHWREV RDAGADIVLG NTYHLMLRPG AERIAALGGL QKFTTWNGPM LTDSGGFQVM SLAQLRKVTE KAVNFRSHID GAAIELSPER AIEVQLLLGS DIAMQLDECV RLPAERDDID RAMRLSLRWA ERCKRAFEHA PQGHMLFGIV QGGDVPELRQ QSARGLIEIG FHGYAIGGLA VGEPQQVMLA MIEETAPVLP QDRPRYLMGV GTPEDILEAV ARGIDMFDCV MPTRNGRHGV AFTRFGSVNL RNARHADDPR PLDAESNWPS TRNCSRAYLH HLVKSGETLG AMLLSEINIA YYQSLMSGIR EAIGNGTFEA FRQQTREDWA RGDIPAL
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