| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2581 |
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| Symbol | |
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| ID | 3970920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2804506 |
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| End bp | 2805363 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925691 |
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| Product | D-amino acid aminotransferase |
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| Protein accession | YP_532450 |
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| Protein GI | 90424080 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.417434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.245371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCA TCGCCTATGT CAACGGCCAC TATCAGGATC TGCGTGACGC CTGCGTCAAC
ATCGAGGATC GCGGTTATCA ATTCGCCGAC GGCGTCTATG AGGTCTGCGA AATCCGTGGC
GGCCAGATCG TCGACTATCC CCGGCACATG GCGCGGCTGC AGCGCTCTTT AGGCGAATTG
CGGATCGCGA TGCCGATGCC GCTGGCGGCG CTGCAGATCG TGCTGCGCGA GGTGGTCCGG
CGCAACCGGG TCGGCTACGG CATCGTCTAT CTGCAGGTCA CCCGCGGCGT GGCGCGGCGC
GACCACGGCT TTCCGCCGGC CTCGGTGAAG CCCAGCATCG TGGTCACCGC GCGGCCGCTG
AATTTTGCCA AGAATCAGGA CACCGCGGCG CACGGCATCA AGGTGATCAC TTATCCGGAG
AATCGCTGGC CGCGGGTCGA CATCAAGTCG GTGGCGCTGT TGCCCAACGT GCTGGCGAAG
CAGGCGGCGC GCGAGCAGGG CGCCTATGAG GCCTGGTATG TCGACGGCGA CGGCCACGTC
ACCGAGGGTG CCTCCAGCAA TGCCTGGATC GTCACCAAGG AGGGCCGGGT GGTGACCCGC
TCCGCCGACA GCGGCATCCT GCCGGGCATC ACCCGGGCGG TGCTGATCGA GGCGCTGGCG
GCGCTGCAGC TGCGATTCGA GGAGCGGCCG TTCACCCCGC AGGAGGCGTT TGGCGCCGCC
GAAGCCTTCG TCACCGCCTC CAGCCAGATC GTGATGCCTG TGGTGGCGAT CGATGGACAA
CTTATCGGCG ACGGTAAACC TGGTAAAATT ACCAGGCGGC TGCGGGAGCA ATTCCACCGC
TTTTCGAGTT TTTCATGA
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| Protein sequence | MARIAYVNGH YQDLRDACVN IEDRGYQFAD GVYEVCEIRG GQIVDYPRHM ARLQRSLGEL
RIAMPMPLAA LQIVLREVVR RNRVGYGIVY LQVTRGVARR DHGFPPASVK PSIVVTARPL
NFAKNQDTAA HGIKVITYPE NRWPRVDIKS VALLPNVLAK QAAREQGAYE AWYVDGDGHV
TEGASSNAWI VTKEGRVVTR SADSGILPGI TRAVLIEALA ALQLRFEERP FTPQEAFGAA
EAFVTASSQI VMPVVAIDGQ LIGDGKPGKI TRRLREQFHR FSSFS
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