Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2579 |
Symbol | |
ID | 3970918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2800801 |
End bp | 2803086 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637925689 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_532448 |
Protein GI | 90424078 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.838184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.345494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCG CAGATACGGC GGCCCCATCT TCCGAACCGC ACAAGGCAGA ACCGCGCAGG CGCCGGCTGC ACAAGCTGTT GGCGCCGTTC GCGGTTGCCC TGGCGCTGCT GTCGGCGTTC CTGACCTTCG TGGTGTTGAC CGGCCTGACC CCGATCACGC CGACTCGGCA GGTGGTGGTC ACCTTCCTGC TGATCAACGC CGCCACCGTG CTGCTGCTGG TGATGATCAT CGCCCGCGAG TTGTGGCAGG TGGTGCAGGC GCGGCGGCGC GGACGCGCCG CGGCCAGACT CCACGTGCAG ATCGTCAGCC TGTTCTCGGT GATCGCGGTG CTGCCGGCGG TGCTGGTGTC GATCGTCGCC AATGTCACCA TCGACCGCGG GCTGGACCGG CTGTTCTCCG GGCCGACCCG GGCGGTGATC CAGAACTCGC TGATCGTCGC CAACGCCTAT CTGCACGAAC ACGCCCAGCT GATTCGCGGC GACATCATCG GCATGGCCAA CGACGTCAAT CATGCCCGGC CGCTGTTCGA CCAGGACCGC CAGAGTTTCC GGCAGGTTCT CACCGCCGGC GCCGCCTCGC GCAATCTGCC CGGCGCGATG TTGATCGACA AGGATCGCAA CATCCTGGAA TCGGCGCAGA CCGGCATCCG GCAGGACTTC GACACCCCGG CGCCGGAATT CCTCAGCAAC GTCGACGACA CCGAGCCGCA GATCGCGGTG TTCATCGAGG CCAACTACGT CGCCGCGGTG ATCCGGCTCA GCGCGTTCAG CGACACCTTC CTTTATGTCG CGCGACTGCT CGATCCGCGG GTGGTGGCGC AGCTGCGCCA GACCCAGGCC AGCGTCGCCG AATATGCCGA GATCGAAGCC AGCCGGCTCG GCTTCCAGGT GACCTTGGCG CTGTTGTTCA CGGTGATCGC GCTCACCGTG CTGATGTCGT CGGTGCTGAT CGGGCTGAAT TTCGCCAATT GGCTGGTGGG GCCGATCCGC CGGCTGATGG GCGCCGCCAA TCTGGTGTCG ACCGGCGACC TCGACGTCCA GGTGCCGGTG ATCAAATCCG AAGGCGATCT GGCGCATCTC GGCGAGACCT TCAACAAGAT GACGCAGGAA TTGCGCAGCC AGCGCGACGA GTTGGTCAGC GCCAGCGAGG TGATCGACAG CCGCCGCCGC TTCATCGAGG CTGTGCTGTC GTCGGCCTCC GCCGGCATCA TCGGCGTCGA TGCCTCGGGC TCGATCGGCA TCCTCAACCG CTCGGCCGAG AAGCTGATAG GCCACTCCGA ATCCGAAACG CTCGGCCATC CGTTGACCGA GATCATTCCC GAACTTGACG AGATGATGAA GACCGCGCGC GAGAGCGCGC AGCGCCTGCT GCAGGGCCAG GTCACCATCA ATCGCGAAGG CCACGAGCGC AATCTGTCGG TGCGGATCAG CGCCGAGCAG ACCAGTCACT CGCAGGACAG CTATATCATC ACGCTGGACG ACATCACCGA GCTGGTGTCG GCGCAGCGCA CCTCGGCCTG GGCCGACGTC GCCCGCCGCA TCGCCCATGA GATCAAGAAC CCGCTGACCC CGATCCAGCT GTCGGCCGAG CGCATCAAAC GCAAATTCGG CAAGCTGATC GTCGAGGACA AGGGCATCTT CGAGCAATGC ACCGACACCA TCATCCGCCA GGTCGACGAC ATCCGGCGCA TGGTCGACGA GTTCTCGCGC TTCGCGCGGA TGCCGAAGCC GGTGATTGAG GGCGAGGACG TCGCCGATAC GGTGCGGCAG GCGGTGTTCC TGATGCGGGT CGGACATCCC GACATCGACA TCGCCGCCGA AATCAAGGAC GAACCGCTGC GGGCGCGGTT CGATCGCCGG CTGATCTCGC AGGCGTTGAC CAACATCATC AAGAACGCCA CCGAGGCGAT CGAAGCGGTG CCGCCGGAAG AACTCGGCAA GGGCCGCATC GAAGTGGTGG CGGGGCGCGA GGGCGAGGAC ATCGTGATCG ACGTCATCGA CAACGGCATC GGTCTGCCGA AGACCAGCCG CTCGCGGTTG CTCGAGCCCT ACGTCACCAC CCGCGAGAAG GGCACCGGGC TCGGGCTGGC GATCGTCGGC CGGGTGCTGG CGGATCACGG CGGCGCCATC GAACTCAACG ACGCATCGCT GCTGCGGCCC GGGCAGCGCG GCGCCTGGAT GCGGCTGCGC TTCTCGATCT CCGGCCAGCC GCCGCAAGAA CAGCCCGGCC CGCCGGCGAT CTCGATCCCG GGCGAACCGA AAATTCCAGT CACAAGCGGC AACTAA
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Protein sequence | MTSADTAAPS SEPHKAEPRR RRLHKLLAPF AVALALLSAF LTFVVLTGLT PITPTRQVVV TFLLINAATV LLLVMIIARE LWQVVQARRR GRAAARLHVQ IVSLFSVIAV LPAVLVSIVA NVTIDRGLDR LFSGPTRAVI QNSLIVANAY LHEHAQLIRG DIIGMANDVN HARPLFDQDR QSFRQVLTAG AASRNLPGAM LIDKDRNILE SAQTGIRQDF DTPAPEFLSN VDDTEPQIAV FIEANYVAAV IRLSAFSDTF LYVARLLDPR VVAQLRQTQA SVAEYAEIEA SRLGFQVTLA LLFTVIALTV LMSSVLIGLN FANWLVGPIR RLMGAANLVS TGDLDVQVPV IKSEGDLAHL GETFNKMTQE LRSQRDELVS ASEVIDSRRR FIEAVLSSAS AGIIGVDASG SIGILNRSAE KLIGHSESET LGHPLTEIIP ELDEMMKTAR ESAQRLLQGQ VTINREGHER NLSVRISAEQ TSHSQDSYII TLDDITELVS AQRTSAWADV ARRIAHEIKN PLTPIQLSAE RIKRKFGKLI VEDKGIFEQC TDTIIRQVDD IRRMVDEFSR FARMPKPVIE GEDVADTVRQ AVFLMRVGHP DIDIAAEIKD EPLRARFDRR LISQALTNII KNATEAIEAV PPEELGKGRI EVVAGREGED IVIDVIDNGI GLPKTSRSRL LEPYVTTREK GTGLGLAIVG RVLADHGGAI ELNDASLLRP GQRGAWMRLR FSISGQPPQE QPGPPAISIP GEPKIPVTSG N
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