| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2578 |
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| Symbol | |
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| ID | 3970917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2799170 |
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| End bp | 2800612 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925688 |
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| Product | nitrogen metabolism transcriptional regulator NtrC |
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| Protein accession | YP_532447 |
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| Protein GI | 90424077 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.152448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.275348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAG GTAGTATTCT TGTCGCCGAT GACGACACCG CCATTCGCAC GGTTCTCAAT
CAGGCGCTGT CGCGTGCCGG ATACGAGGTG CGGCTGACCG GCAACGCCGC GACGCTGTGG
CGCTGGGTCA GCCAGGGCGA GGGCGATCTC GTCATCACCG ACGTGGTGAT GCCGGACGAG
AACGCCTTCG ACCTGCTGCC GCGGATCAAG AAGATGCGGC CCAACCTGCC GGTCATCGTG
ATGAGCGCGC AGAACACCTT CATGACCGCG ATCCGCGCCT CCGAGCGCGG CGCCTATGAG
TATCTGCCGA AGCCGTTCGA CTTGAAGGAA CTGATCGCCA TCGTCGGCCG CGCTTTGGCC
GAACCGAAGG ACCGCGCCGC CAGCCACGCC GACGATTCCG AATTCGATTC GATCCCGCTG
GTCGGCCGCT CGCCGGCGAT GCAGGAAATC TACCGGGTGC TGGCGCGGCT GATGCAGACC
GACCTCACGG TGATGATCTC CGGCGAGAGC GGCACCGGCA AGGAGCTGGT AGCACGCGCG
CTGCACGACT ACGGCAAGCG CCGCAACGGT CCGTTCGTCG CGGTCAACAT GGCGGCGATT
CCGCGCGACC TGATCGAGTC CGAACTGTTC GGCCACGAGC GCGGCGCCTT CACCGGCGCC
AACACCCGCG CCTCTGGCCG CTTCGAACAG GCCGAGGGCG GCACGCTGTT TCTCGACGAG
ATCGGCGACA TGCCGATGGA AGCGCAGACC CGGTTGCTGC GCGTGCTGCA GCAGGGCGAA
TACACCACGG TCGGCGGCCG CACCCCGATC AAGACCGACG TCCGCATCGT CGCGGCCTCC
AACAAGGATC TGCGGATCTT GATCCAGCAG GGCCTGTTCC GAGAAGATTT ATTCTTCCGG
CTCAACGTGG TGCCGCTGCG GTTGCCGCCG CTGCGCGAAC ACATCGAGGA TCTGCCGGAC
CTGGTGCGGC ATTTCTTCGC GCTGGCGGAG AAGGACGGCT TGCCGGCCAA GAAGCTCGAC
GCCCAGGCGT TGGAGCGGTT GAAGCAGCAC CGCTGGCCCG GCAACGTCCG CGAGTTGGAA
AATCTGGCTC GGCGGCTCGC GGCGCTGTAC CCGCAGGACG TTATCACCGG CTCGGTGATC
GACGGCGAAC TGGCGCCGCC CGCGGTGGTG TCCGGCGGCA GCATCTCCAA CACCGTCGAC
AATCTCGGCG GCGCGGTCGA GACCTACCTG TCCTCGCACT TCTCCAGCTT CCCGAACGGC
GTGCCGCCGC CCGGCCTCTA CCATCGGATT CTGCGCGAGA TCGAAGTTCC GCTGCTGACC
GCGGCTTTGG CTGCGACCCG CGGCAACCAG ATTCGCGCCG CCGACCTGCT CGGCCTCAAC
CGCAACACGC TGCGCAAGAA GATCCGCGAC CTCGATATCC AGGTCTATCG CAGCGGCGGT
TGA
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| Protein sequence | MPAGSILVAD DDTAIRTVLN QALSRAGYEV RLTGNAATLW RWVSQGEGDL VITDVVMPDE
NAFDLLPRIK KMRPNLPVIV MSAQNTFMTA IRASERGAYE YLPKPFDLKE LIAIVGRALA
EPKDRAASHA DDSEFDSIPL VGRSPAMQEI YRVLARLMQT DLTVMISGES GTGKELVARA
LHDYGKRRNG PFVAVNMAAI PRDLIESELF GHERGAFTGA NTRASGRFEQ AEGGTLFLDE
IGDMPMEAQT RLLRVLQQGE YTTVGGRTPI KTDVRIVAAS NKDLRILIQQ GLFREDLFFR
LNVVPLRLPP LREHIEDLPD LVRHFFALAE KDGLPAKKLD AQALERLKQH RWPGNVRELE
NLARRLAALY PQDVITGSVI DGELAPPAVV SGGSISNTVD NLGGAVETYL SSHFSSFPNG
VPPPGLYHRI LREIEVPLLT AALAATRGNQ IRAADLLGLN RNTLRKKIRD LDIQVYRSGG
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