| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2577 |
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| Symbol | |
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| ID | 3970916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2797988 |
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| End bp | 2799160 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925687 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_532446 |
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| Protein GI | 90424076 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00911748 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.381184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG CCGCTGAATC GCGCCGCACC GCGCATACCG ATGGCGATGC CATTCTCAAC
GCGCTGCCGA ATCCGGTGAT GCTGGTGGCA CCCGACGGCA AGATCGTCGA CGCCAACATG
GCCGCGGAAT CGTTCTTCGA AATATCAACG CAGCTGTTGC GCCGCCAATC GCTCACCGAG
CTGGTGCCGT TCGGCAGTCC GCTGCTGGCG CTGATCGATC AGGTCCGCGA GTCCGGTTCG
CCGGTCAACG AATACAAGGT CGATCTCGGC ACGCCGCGGA TCGGCGCCGA TCGCCAGGTC
GATCTGCACG TGGCGCCGTT CGCCGAGCGC CCCGGCCATA TCGTGGTGAT GCTGCAGGAG
CGCACCATCG CCGACAAGAT GGACCGTCAA TTGACCCATC GCAGCGCCGC GCGCTCGGTG
ATCGCGCTGG CGGCGATGCT GGCGCATGAG ATCAAGAACC CGCTGTCCGG GATCCGCGGC
GCGGCGCAGC TGCTGGAGCA GGCGGCGTCA TCCGAAGACC GTATGCTGAC GCGGCTGATC
TGCGACGAGG CCGACCGCAT CGTCACGTTG GTCGACCGCA TGGAGGTGTT CGGCGACGAG
CGCCCGGTGG CGCGCGGCCC GGTCAACATC CATTCGGTGC TCGATCACGT GAAGCGGCTG
GCGCAGTCCG GCTTCGCCCG CAACATCAAA TTCAGCGAAG ATTACGATCC CTCGCTGCCG
CCGGTGCTGG CCAATCAGGA TCAGCTGATC CAGGTGTTTC TCAACCTGGT GAAGAACGCC
GCCGAAGCCG TGGTCGATCT CGGCACCGAC GGCGAGATCC AGCTCACCAC CGCGTTCCGC
CCCGGGGTGC GATTGTCGGT GCCCGGCAAA AAATCGCGGG TATCGCTGCC GTTGGAGTTC
TGCGTCAAGG ACAACGGCCC CGGCGTGCCG GAAGATCTGC TGCCGAATCT GTTCGATCCG
TTCGTCACCA CCAAGCCGTC GGGCTCCGGG CTCGGGCTTG CACTGGTGGC CAAGATCGTC
GGCGACCATG GCGGCATCAT CGAATGCGAG TCGCAGCCGC GCAAGACCAC GTTCCGCGTG
CTGCTGCCGA TGTTCAACAC CGCAAAGAAT TACAATCAAG GCCTTGGCGA CGACGCGCCG
GCGTCGTCCC GCGCCGCCCA GGATGCAAGA TGA
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| Protein sequence | MSSAAESRRT AHTDGDAILN ALPNPVMLVA PDGKIVDANM AAESFFEIST QLLRRQSLTE
LVPFGSPLLA LIDQVRESGS PVNEYKVDLG TPRIGADRQV DLHVAPFAER PGHIVVMLQE
RTIADKMDRQ LTHRSAARSV IALAAMLAHE IKNPLSGIRG AAQLLEQAAS SEDRMLTRLI
CDEADRIVTL VDRMEVFGDE RPVARGPVNI HSVLDHVKRL AQSGFARNIK FSEDYDPSLP
PVLANQDQLI QVFLNLVKNA AEAVVDLGTD GEIQLTTAFR PGVRLSVPGK KSRVSLPLEF
CVKDNGPGVP EDLLPNLFDP FVTTKPSGSG LGLALVAKIV GDHGGIIECE SQPRKTTFRV
LLPMFNTAKN YNQGLGDDAP ASSRAAQDAR
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