Gene RPC_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2573 
Symbol 
ID3970912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2794181 
End bp2794657 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID637925683 
Productcyclase/dehydrase 
Protein accessionYP_532442 
Protein GI90424072 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.16372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.720561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAT TTCAAAGCAA GCGCCGGGTC CGTCACAGCG CGCTGAAAAT GTTCGATCTG 
GTCGCCGACA TCGAGCGCTA TCCGGAGTTC GTGCCGCTGT GCAGCGCGCT TAAGATCAAG
CATCGCGCGC AGCGCCCCGA CGGCACCGAA GTGCTGACCG CCGACATGAC GGTGTCGTTC
AAGCTGGTGC GCGAGACCTT CACCAGCCGG GTGACGCTCG ACCGCGCCAA TCTGAAGATT
TTGGTGGAGT ATCTGCAGGG CCCGTTCTCC AATCTGGAGA ACCGCTGGAG CTTCGAATCG
CGCGGCGACG ACGCTTGCGA CGTCGGCTTC TTCCTCAGCT ACGAGTTCAG AAACAAGATG
CTGGCGCTGC TGATGGGGAC GATGTTCGAC ACCGCGTTCC ACCGCTTCGC CGCGGCGTTC
GAGCAACGCG CCGACGCGAT TTACGGCCGC GCCGTACTGC GCAAGCTGAC GGTATAG
 
Protein sequence
MPQFQSKRRV RHSALKMFDL VADIERYPEF VPLCSALKIK HRAQRPDGTE VLTADMTVSF 
KLVRETFTSR VTLDRANLKI LVEYLQGPFS NLENRWSFES RGDDACDVGF FLSYEFRNKM
LALLMGTMFD TAFHRFAAAF EQRADAIYGR AVLRKLTV