Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2573 |
Symbol | |
ID | 3970912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2794181 |
End bp | 2794657 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637925683 |
Product | cyclase/dehydrase |
Protein accession | YP_532442 |
Protein GI | 90424072 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.16372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.720561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAT TTCAAAGCAA GCGCCGGGTC CGTCACAGCG CGCTGAAAAT GTTCGATCTG GTCGCCGACA TCGAGCGCTA TCCGGAGTTC GTGCCGCTGT GCAGCGCGCT TAAGATCAAG CATCGCGCGC AGCGCCCCGA CGGCACCGAA GTGCTGACCG CCGACATGAC GGTGTCGTTC AAGCTGGTGC GCGAGACCTT CACCAGCCGG GTGACGCTCG ACCGCGCCAA TCTGAAGATT TTGGTGGAGT ATCTGCAGGG CCCGTTCTCC AATCTGGAGA ACCGCTGGAG CTTCGAATCG CGCGGCGACG ACGCTTGCGA CGTCGGCTTC TTCCTCAGCT ACGAGTTCAG AAACAAGATG CTGGCGCTGC TGATGGGGAC GATGTTCGAC ACCGCGTTCC ACCGCTTCGC CGCGGCGTTC GAGCAACGCG CCGACGCGAT TTACGGCCGC GCCGTACTGC GCAAGCTGAC GGTATAG
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Protein sequence | MPQFQSKRRV RHSALKMFDL VADIERYPEF VPLCSALKIK HRAQRPDGTE VLTADMTVSF KLVRETFTSR VTLDRANLKI LVEYLQGPFS NLENRWSFES RGDDACDVGF FLSYEFRNKM LALLMGTMFD TAFHRFAAAF EQRADAIYGR AVLRKLTV
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